RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 GLULP15104 373 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 GARTP22102 1010 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 POLR2BP30876 1174 aaKnown RBP10.36□□□□□ -0.75
MSH5-218ENST00000494646 VIPR2P41587 438 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 MYBPC2Q14324 1141 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 UBXN2BQ14CS0 331 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 MLF2Q15773 248 aaPredicted RBP10.36□□□□□ -0.75
MSH5-218ENST00000494646 E2F4Q16254 413 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 LMBRD2Q68DH5 695 aaPredicted RBP10.36□□□□□ -0.75
MSH5-218ENST00000494646 FRMD5Q7Z6J6 570 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 DNAJB7Q7Z6W7 309 aaPredicted RBP10.36□□□□□ -0.75
MSH5-218ENST00000494646 LRRTM3Q86VH5 581 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 BRSK2Q8IWQ3 736 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 CSGALNACT2Q8N6G5 542 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 RDH13Q8NBN7 331 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 SHKBP1Q8TBC3 707 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 FAM200AQ8TCP9 573 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 GIPC2Q8TF65 315 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 ELSPBP1Q96BH3 223 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 SHDQ96IW2 340 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 LRRC3Q9BY71 257 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 TRIM9Q9C026 710 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 LRRC27Q9C0I9 530 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 DNAJC25Q9H1X3 360 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 BLZF1Q9H2G9 400 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 TNMDQ9H2S6 317 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 SLITRK6Q9H5Y7 841 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 TMEM206Q9H813 350 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 PDE11AQ9HCR9 933 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 HEBP1Q9NRV9 189 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 KBTBD4Q9NVX7 518 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 RBAKQ9NYW8 714 aaPredicted RBP10.36□□□□□ -0.75
MSH5-218ENST00000494646 MAFFQ9ULX9 164 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 PCDHA7Q9UN72 937 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 TICRRQ7Z2Z1 1910 aa10.36□□□□□ -0.75
MSH5-218ENST00000494646 KIF26AQ9ULI4 1882 aaPredicted RBP10.36□□□□□ -0.75
MSH5-218ENST00000494646 PTPRZ1P23471 2315 aaPredicted RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 DENND4CQ5VZ89 1909 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 KANSL1LA0AUZ9 987 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 CLIC2O15247 247 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 EXTL3O43909 919 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ABCB7O75027 752 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 MICAL2O94851 1124 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 YEATS4O95619 227 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 CYP11A1P05108 521 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 FCARP24071 287 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 GDI1P31150 447 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 HOXD13P35453 343 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 AFMP43652 599 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ME1P48163 572 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ASIC1P78348 528 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 AMPD3Q01432 767 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 PFKPQ01813 784 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 POU5F1Q01860 360 aaKnown RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 DNM1Q05193 864 aaKnown RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 PLD1Q13393 1074 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 MGAT5BQ3V5L5 792 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 SV2CQ496J9 727 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 STXBP5Q5T5C0 1151 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 VITQ6UXI7 678 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ASCL5Q7RTU5 278 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 NT5DC4Q86YG4 428 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 GPD1LQ8N335 351 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 C1orf127Q8N9H9 656 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 IQUBQ8NA54 791 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 PJA1Q8NG27 643 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ZSCAN18Q8TBC5 510 aaPredicted RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 CACTINQ8WUQ7 758 aaKnown RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 SMARCD2Q92925 531 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ASB16Q96NS5 453 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 SEPT5Q99719 369 aaPredicted RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 LPIN3Q9BQK8 851 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 TRMT61BQ9BVS5 477 aaKnown RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 ZCWPW1Q9H0M4 648 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ATXN3LQ9H3M9 355 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 BRD9Q9H8M2 597 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ZNF334Q9HCZ1 680 aaPredicted RBP10.35□□□□□ -0.75
MSH5-218ENST00000494646 DLGAP2Q9P1A6 1054 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 DSEQ9UL01 958 aa10.35□□□□□ -0.75
MSH5-218ENST00000494646 ATG2BQ96BY7 2078 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 HEPACAM2A8MVW5 462 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 PAX3P23760 479 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 GABRR2P28476 465 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 NBL1P41271 181 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 TUFMP49411 452 aaKnown RBP10.34□□□□□ -0.75
MSH5-218ENST00000494646 EPHA5P54756 1037 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 PRKCQQ04759 706 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 BFSP1Q12934 665 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 ALCAMQ13740 583 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 TPRG1Q6ZUI0 275 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 TMC8Q8IU68 726 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 CBWD2Q8IUF1 395 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 NELFCDQ8IXH7 590 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 ZNF507Q8TCN5 953 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 CHAMP1Q96JM3 812 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 C7orf25Q9BPX7 421 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 CUEDC2Q9H467 287 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 TMLHEQ9NVH6 421 aa10.34□□□□□ -0.75
MSH5-218ENST00000494646 ABI2Q9NYB9 513 aaPredicted RBP10.34□□□□□ -0.75
MSH5-218ENST00000494646 FAM13BQ9NYF5 915 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms