RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 DENND1BQ6P3S1 775 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 MRPL47Q9HD33 250 aaKnown RBP17.57■□□□□ 0.4
ATG4B-225ENST00000494465 ERVK-5Q9HDB9 667 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
ATG4B-225ENST00000494465 MYO1FO00160 1098 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 PPEF2O14830 753 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 ADAMTS4O75173 837 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 PROSCO94903 275 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 TAF2Q6P1X5 1199 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 ZDHHC14Q8IZN3 488 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 LHX5Q9H2C1 402 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 EPB41L5Q9HCM4 733 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 CYTH4Q9UIA0 394 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 SCINQ9Y6U3 715 aa17.56■□□□□ 0.4
ATG4B-225ENST00000494465 ESYT3A0FGR9 886 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 P4HA1P13674 534 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 AKAP5P24588 427 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 YARSP54577 528 aaKnown RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 GUCY2DQ02846 1103 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 GDF6Q6KF10 455 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 WNT8BQ93098 351 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 C18orf25Q96B23 403 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 TMEM176AQ96HP8 235 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 NAP1L3Q99457 506 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 CELF4Q9BZC1 486 aaKnown RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 SLITRK6Q9H5Y7 841 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 PARVAQ9NVD7 372 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 BRCA2P51587 3418 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 CALB1P05937 261 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 RARBP10826 455 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 CD19P15391 556 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 SLC1A1P43005 524 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 CARSP49589 748 aaKnown RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 PTPN11Q06124 597 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 TRADDQ15628 312 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 GLRA4Q5JXX5 417 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 DAB2IPQ5VWQ8 1189 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 ADAT2Q7Z6V5 191 aaKnown RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 FAM228AQ86W67 206 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 IFT20Q8IY31 132 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 FEZF2Q8TBJ5 459 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 CASKIN2Q8WXE0 1202 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 TRIM6Q9C030 488 aaPredicted RBP17.55■□□□□ 0.4
ATG4B-225ENST00000494465 RNF39Q9H2S5 420 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 RNF19AQ9NV58 838 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 RNF186Q9NXI6 227 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 AMACRQ9UHK6 382 aa17.55■□□□□ 0.4
ATG4B-225ENST00000494465 CCND3P30281 292 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-225ENST00000494465 RWDD2BP57060 319 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 RPL7AP62424 266 aaKnown RBP17.54■□□□□ 0.4
ATG4B-225ENST00000494465 CLUL1Q15846 466 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 XKR4Q5GH76 650 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 PPP1R15BQ5SWA1 713 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 GDAP1L1Q96MZ0 367 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 BARX2Q9UMQ3 279 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-225ENST00000494465 TMEM191CA6NGB0 347 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 MED7O43513 233 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 PTPN20Q4JDL3 420 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 APOL6Q9BWW8 343 aa17.54■□□□□ 0.4
ATG4B-225ENST00000494465 FAM124BQ9H5Z6 455 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-225ENST00000494465 TLR3O15455 904 aaKnown RBP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 NDST1P52848 882 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 MRPS6P82932 125 aaKnown RBP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 ZNF252P-AS1Q0IIN9 211 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 SEL1L2Q5TEA6 688 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 SMG8Q8ND04 991 aaKnown RBP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 DDX27Q96GQ7 796 aaKnown RBP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 SPC25Q9HBM1 224 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 ST7Q9NRC1 585 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 CEP83Q9Y592 693 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 THSD7BQ9C0I4 1608 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 TCRBV7S2A1N4TA0A589 114 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 O00370 1275 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 ELNP15502 786 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 SP3Q02447 781 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 MYO1EQ12965 1108 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 KCTD19Q17RG1 926 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 CCSAPQ6IQ19 270 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 ERICH1Q86X53 443 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 SLC13A5Q86YT5 568 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 PRELID2Q8N945 189 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 KLHDC9Q8NEP7 349 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 BEST2Q8NFU1 509 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 CAPNS2Q96L46 248 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 XPNPEP3Q9NQH7 507 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 KLK14Q9P0G3 267 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 TJP2Q9UDY2 1190 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.53■□□□□ 0.4
ATG4B-225ENST00000494465 IPPQ9Y573 584 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 CDY2AQ9Y6F7 541 aa17.53■□□□□ 0.4
ATG4B-225ENST00000494465 SMIM28A0A1B0GU29 152 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 EPHB4P54760 987 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 TAS2R40P59535 323 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 SMC1AQ14683 1233 aaKnown RBP17.52■□□□□ 0.4
ATG4B-225ENST00000494465 SIX1Q15475 284 aaPredicted RBP17.52■□□□□ 0.4
ATG4B-225ENST00000494465 CYP4A22Q5TCH4 519 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 C9orf57Q5W0N0 161 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 SERINC5Q86VE9 423 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 LRRC52Q8N7C0 313 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 ARRDC4Q8NCT1 418 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms