RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 LY6G5CQ5SRR4 150 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 KRT40Q6A162 431 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 GSPT2Q8IYD1 628 aaKnown RBP5.23□□□□□ -1.57
CLIP4-212ENST00000493551 ZGPATQ8N5A5 531 aaKnown RBP5.23□□□□□ -1.57
CLIP4-212ENST00000493551 MIGA1Q8NAN2 632 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 WDR48Q8TAF3 677 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.23□□□□□ -1.57
CLIP4-212ENST00000493551 NOL10Q9BSC4 688 aaKnown RBP5.23□□□□□ -1.57
CLIP4-212ENST00000493551 TANGO6Q9C0B7 1094 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 RPAP3Q9H6T3 665 aaPredicted RBP5.23□□□□□ -1.57
CLIP4-212ENST00000493551 HMG20BQ9P0W2 317 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 SRPK3Q9UPE1 567 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 TCF20Q9UGU0 1960 aaKnown RBP5.23□□□□□ -1.57
CLIP4-212ENST00000493551 IL16Q14005 1332 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 KIF16BQ96L93 1317 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 SALL1Q9NSC2 1324 aa5.23□□□□□ -1.57
CLIP4-212ENST00000493551 VCANP13611 3396 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 GRID2IPA4D2P6 1211 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 SLC15A5A6NIM6 579 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 MPHOSPH10O00566 681 aaKnown RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 SCAMP3O14828 347 aaKnown RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 FAM20BO75063 409 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 GLRX3O76003 335 aaKnown RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 DDAH1O94760 285 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 PGK2P07205 417 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 ASNSP08243 561 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 UBTFL1P0CB47 393 aaPredicted RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 CSF2RAP15509 400 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 VCAM1P19320 739 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 AOAHP28039 575 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 HOXA7P31268 230 aaPredicted RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 CCNA1P78396 465 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 GRB14Q14449 540 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 RABL3Q5HYI8 236 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 KANK2Q63ZY3 851 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 MRM1Q6IN84 353 aaKnown RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 NAA16Q6N069 864 aaPredicted RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 KCNT2Q6UVM3 1135 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 ADGRA1Q86SQ6 560 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 IFNL3Q8IZI9 196 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 SPICE1Q8N0Z3 855 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 ZNF276Q8N554 614 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 SPATA5Q8NB90 893 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 PROKR1Q8TCW9 393 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 NSUN4Q96CB9 384 aaKnown RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 UIMC1Q96RL1 719 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 LRFN3Q9BTN0 628 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 MLST8Q9BVC4 326 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 MOV10L1Q9BXT6 1211 aaKnown RBP5.22□□□□□ -1.57
CLIP4-212ENST00000493551 GPR87Q9BY21 358 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 IPPKQ9H8X2 491 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 XPNPEP3Q9NQH7 507 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 RABGAP1Q9Y3P9 1069 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 SIPA1L1O43166 1804 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 FLT1P17948 1338 aa5.22□□□□□ -1.57
CLIP4-212ENST00000493551 PRUNE2Q8WUY3 3088 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 TCRBV5S4A2TA0A5A2 114 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 MYADML2A6NDP7 307 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 C19orf81C9J6K1 198 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 SEPT4O43236 478 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 LDHCP07864 332 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 MC4RP32245 332 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 CYP2C18P33260 490 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 IL15P40933 162 aaPredicted RBP5.21□□□□□ -1.58
CLIP4-212ENST00000493551 STAT5BP51692 787 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 GSTO1P78417 241 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 MVPQ14764 893 aaKnown RBP5.21□□□□□ -1.58
CLIP4-212ENST00000493551 SLC10A6Q3KNW5 377 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 TNNI3KQ59H18 835 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 ZNF362Q5T0B9 420 aaPredicted RBP5.21□□□□□ -1.58
CLIP4-212ENST00000493551 GRAMD4Q6IC98 578 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 ZNF365Q70YC5 407 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 EEPD1Q7L9B9 569 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 METTL16Q86W50 562 aaKnown RBP5.21□□□□□ -1.58
CLIP4-212ENST00000493551 FAM9BQ8IZU0 186 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 SLC44A5Q8NCS7 719 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 ATXN2LQ8WWM7 1075 aaKnown RBP5.21□□□□□ -1.58
CLIP4-212ENST00000493551 SSH1Q8WYL5 1049 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 LPPQ93052 612 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 MEIS3Q99687 375 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 OR10A5Q9H207 317 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 TOR3AQ9H497 397 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 PI4KBQ9UBF8 816 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 HERC5Q9UII4 1024 aaKnown RBP5.21□□□□□ -1.58
CLIP4-212ENST00000493551 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.21□□□□□ -1.58
CLIP4-212ENST00000493551 ATP23Q9Y6H3 246 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 PLXNA1Q9UIW2 1896 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 RLFQ13129 1914 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 UMODL1Q5DID0 1318 aa5.21□□□□□ -1.58
CLIP4-212ENST00000493551 A0A1W2PQU0 124 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 KIAA0355O15063 1070 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 SMAD7O15105 426 aaKnown RBP5.2□□□□□ -1.58
CLIP4-212ENST00000493551 B3GALT2O43825 422 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 CIAO1O76071 339 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 ABHD16AO95870 558 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 ITGB1P05556 798 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 HLA-DOAP06340 250 aa5.2□□□□□ -1.58
CLIP4-212ENST00000493551 RARBP10826 455 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms