RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 C2orf15Q8WU43 125 aaKnown RBP9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 DEPDC1BQ8WUY9 529 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 E2F7Q96AV8 911 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 RSPRY1Q96DX4 576 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 ACCSQ96QU6 501 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 TMEM209Q96SK2 561 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 TRMT61BQ9BVS5 477 aaKnown RBP9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 FGFBP2Q9BYJ0 223 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 ZHX3Q9H4I2 956 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 MRPL44Q9H9J2 332 aaKnown RBP9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 IL21Q9HBE4 155 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 ZNF334Q9HCZ1 680 aaPredicted RBP9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 ASAH2Q9NR71 780 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 OBP2AQ9NY56 170 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 EXOC7Q9UPT5 735 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 PCDHB13Q9Y5F0 798 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 DCHS1Q96JQ0 3298 aa9.06□□□□□ -0.96
SMARCB1-207ENST00000491967 GREB1Q4ZG55 1949 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 OBSL1O75147 1896 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 SOBPA7XYQ1 873 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 CYB561D2O14569 222 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 KIAA0391O15091 583 aaKnown RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 LILRB5O75023 590 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 FGF19O95750 216 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 TDGF1P13385 188 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 PDIA4P13667 645 aaKnown RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 ATF6P18850 670 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 TARSP26639 723 aaKnown RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 TXLNAP40222 546 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 PNPLA4P41247 253 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 VIPR2P41587 438 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 ALDH1A3P47895 512 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 TUFMP49411 452 aaKnown RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 TAF6P49848 677 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 EHHADHQ08426 723 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 WSCD1Q658N2 575 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 SCARA3Q6AZY7 606 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 ZNF852Q6ZMS4 543 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 TPRG1Q6ZUI0 275 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 BRSK2Q8IWQ3 736 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 ADSSL1Q8N142 457 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 SUMF1Q8NBK3 374 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 ZBTB44Q8NCP5 570 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 ZSCAN18Q8TBC5 510 aaPredicted RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 SPATA18Q8TC71 538 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 POMGNT1Q8WZA1 660 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 IRF7Q92985 503 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 FAM212AQ96EL1 285 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 LRRC3BQ96PB8 259 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 PGLYRP2Q96PD5 576 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 PKMYT1Q99640 499 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 BCO2Q9BYV7 579 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 TNMDQ9H2S6 317 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 PRMT8Q9NR22 394 aaPredicted RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 HEBP1Q9NRV9 189 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 PANK4Q9NVE7 773 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 GDAP2Q9NXN4 497 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 SLC27A5Q9Y2P5 690 aa9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 MRPS17Q9Y2R5 130 aaKnown RBP9.05□□□□□ -0.96
SMARCB1-207ENST00000491967 ANAPC1Q9H1A4 1944 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 MAN2B1O00754 1011 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 GABRDO14764 452 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 CHADO15335 359 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 NCAM2O15394 837 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 EXTL3O43909 919 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 YEATS4O95619 227 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 LDHAP00338 332 aaKnown RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 LMNAP02545 664 aaKnown RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 HAPLN1P10915 354 aaPredicted RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 MYL4P12829 197 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 GJA1P17302 382 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 CD72P21854 359 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 STAT6P42226 847 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 CEBPZQ03701 1054 aaKnown RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 ARMCX5Q6P1M9 558 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 EPM2AIP1Q7L775 607 aaPredicted RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 TMEM150AQ86TG1 271 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 ITIH5Q86UX2 942 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 ARID3BQ8IVW6 561 aaPredicted RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 LRRC52Q8N7C0 313 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 C1orf127Q8N9H9 656 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 LEO1Q8WVC0 666 aaPredicted RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 MYRFLQ96LU7 910 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 ACBD6Q9BR61 282 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 CBWD1Q9BRT8 395 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 FAM213AQ9BRX8 229 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 IER2Q9BTL4 223 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 PANK2Q9BZ23 570 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 CHRDQ9H2X0 955 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 CUEDC2Q9H467 287 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 TMEM206Q9H813 350 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 BRD9Q9H8M2 597 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 ABCB6Q9NP58 842 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 TBC1D7Q9P0N9 293 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 SIX4Q9UIU6 781 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 ZMYM5Q9UJ78 669 aa9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 ZNF638Q14966 1978 aaKnown RBP9.04□□□□□ -0.96
SMARCB1-207ENST00000491967 PTPRDP23468 1912 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms