RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 MRPS17Q9Y2R5 130 aaKnown RBP16.99■□□□□ 0.31
SMPD4-220ENST00000491319 GREB1Q4ZG55 1949 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 ANAPC1Q9H1A4 1944 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 GPR179Q6PRD1 2367 aa16.99■□□□□ 0.31
SMPD4-220ENST00000491319 PTPRDP23468 1912 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 CYB561D2O14569 222 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 NCAM2O15394 837 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 GCNT3O95395 438 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 GAP43P17677 238 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 PAX3P23760 479 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 RPS9P46781 194 aaKnown RBP16.98■□□□□ 0.31
SMPD4-220ENST00000491319 CSTF1Q05048 431 aaKnown RBP16.98■□□□□ 0.31
SMPD4-220ENST00000491319 ZNF528Q3MIS6 628 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 L1TD1Q5T7N2 865 aaKnown RBP16.98■□□□□ 0.31
SMPD4-220ENST00000491319 GAREM2Q75VX8 874 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 GPIHBP1Q8IV16 184 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 MFSD6LQ8IWD5 586 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 ZNF687Q8N1G0 1237 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 SAAL1Q96ER3 474 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 SEPT5Q99719 369 aaPredicted RBP16.98■□□□□ 0.31
SMPD4-220ENST00000491319 MKNK1Q9BUB5 465 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 GPR88Q9GZN0 384 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 ZCWPW1Q9H0M4 648 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 DSEQ9UL01 958 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 PIAS3Q9Y6X2 628 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 WDR87Q6ZQQ6 2873 aa16.98■□□□□ 0.31
SMPD4-220ENST00000491319 DMXL1Q9Y485 3027 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 ATG2BQ96BY7 2078 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 ARNTLO00327 626 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 ZNF263O14978 683 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 KINO60870 393 aaKnown RBP16.97■□□□□ 0.31
SMPD4-220ENST00000491319 IL18RAPO95256 599 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 IDEP14735 1019 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 ATF6P18850 670 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 GABRR2P28476 465 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 STAT6P42226 847 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 POU5F1Q01860 360 aaKnown RBP16.97■□□□□ 0.31
SMPD4-220ENST00000491319 POSTNQ15063 836 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 MGAT5BQ3V5L5 792 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 TSSK4Q6SA08 328 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 CCDC73Q6ZRK6 1079 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 DNAJB7Q7Z6W7 309 aaPredicted RBP16.97■□□□□ 0.31
SMPD4-220ENST00000491319 METTL23Q86XA0 190 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 FAM84AQ96KN4 292 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 ACCSQ96QU6 501 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 FAM213AQ9BRX8 229 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 PANK2Q9BZ23 570 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 TRPV5Q9NQA5 729 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 OLFML3Q9NRN5 406 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 HSFX1Q9UBD0 423 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 EXOC7Q9UPT5 735 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 ASB3Q9Y575 518 aa16.97■□□□□ 0.31
SMPD4-220ENST00000491319 HELZP42694 1942 aaKnown RBP16.96■□□□□ 0.31
SMPD4-220ENST00000491319 FRMD3A2A2Y4 597 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-220ENST00000491319 MAN2B1O00754 1011 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 MTAPQ13126 283 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 SLC39A14Q15043 492 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 SV2CQ496J9 727 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 ITIH5Q86UX2 942 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 LRRTM3Q86VH5 581 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 ARID3BQ8IVW6 561 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-220ENST00000491319 BRSK2Q8IWQ3 736 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 SUMF1Q8NBK3 374 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 FAM200AQ8TCP9 573 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 FAM3CQ92520 227 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 BORCS6Q96GS4 357 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 INTS4Q96HW7 963 aaKnown RBP16.96■□□□□ 0.31
SMPD4-220ENST00000491319 ZNF560Q96MR9 790 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 HINFPQ9BQA5 517 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 ATXN3LQ9H3M9 355 aa16.96■□□□□ 0.31
SMPD4-220ENST00000491319 PRMT8Q9NR22 394 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-220ENST00000491319 MORC2Q9Y6X9 1032 aaPredicted RBP16.96■□□□□ 0.31
SMPD4-220ENST00000491319 FRYLO94915 3013 aa16.96■□□□□ 0.3
SMPD4-220ENST00000491319 RALGAPA1Q6GYQ0 2036 aa16.96■□□□□ 0.3
SMPD4-220ENST00000491319 CEP250Q9BV73 2442 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 GOLGA8IPA6NC78 632 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 GOLGA8JA6NMD2 632 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 KPNA7A9QM74 516 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 POLR2BP30876 1174 aaKnown RBP16.95■□□□□ 0.3
SMPD4-220ENST00000491319 CYP4F8P98187 520 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 TFAMQ00059 246 aaKnown RBP16.95■□□□□ 0.3
SMPD4-220ENST00000491319 FCHO2Q0JRZ9 810 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 GPR158Q5T848 1215 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 NT5DC4Q86YG4 428 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 YAF2Q8IY57 180 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 KIAA2013Q8IYS2 634 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 THEM5Q8N1Q8 247 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 PDILTQ8N807 584 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 E2F7Q96AV8 911 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 CBWD1Q9BRT8 395 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 CHRDQ9H2X0 955 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 IL21Q9HBE4 155 aa16.95■□□□□ 0.3
SMPD4-220ENST00000491319 ABI2Q9NYB9 513 aaPredicted RBP16.95■□□□□ 0.3
SMPD4-220ENST00000491319 SLC38A8A6NNN8 435 aa16.94■□□□□ 0.3
SMPD4-220ENST00000491319 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
SMPD4-220ENST00000491319 CHADO15335 359 aa16.94■□□□□ 0.3
SMPD4-220ENST00000491319 STX6O43752 255 aa16.94■□□□□ 0.3
SMPD4-220ENST00000491319 PRPF6O94906 941 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms