RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 NYAP2Q9P242 653 aa20.43■□□□□ 0.86
SNAPC3-206ENST00000490969 PIK3CDO00329 1044 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 MFAP3P55082 362 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 TBC1D10BQ4KMP7 808 aaPredicted RBP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 SLFN13Q68D06 897 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 GSTA5Q7RTV2 222 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 CCNJLQ8IV13 435 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 B4GALNT2Q8NHY0 566 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 PLEKHO2Q8TD55 490 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 STMN2Q93045 179 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 MCUR1Q96AQ8 359 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 GBP5Q96PP8 586 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 TUBB6Q9BUF5 446 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 TMEM117Q9H0C3 514 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 PDP2Q9P2J9 529 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 MAP3K7O43318 606 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 BMP3P12645 472 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 HOXA13P31271 388 aaPredicted RBP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 SSR1P43307 286 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 DYNC1I2Q13409 638 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 HP1BP3Q5SSJ5 553 aaPredicted RBP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 ARHGAP22Q7Z5H3 698 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 MICALL2Q8IY33 904 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 MRRFQ96E11 262 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 NSL1Q96IY1 281 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 CBWD1Q9BRT8 395 aa20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 MAK16Q9BXY0 300 aaKnown RBP20.42■□□□□ 0.86
SNAPC3-206ENST00000490969 K7ENM7 598 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 SERPINB4P48594 390 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 OVGP1Q12889 678 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 FASTKD3Q14CZ7 662 aaKnown RBP20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 CAPN12Q6ZSI9 719 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 VPS52Q8N1B4 723 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 WDR60Q8WVS4 1066 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 ADAM33Q9BZ11 813 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 GLIS2Q9BZE0 524 aaPredicted RBP20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 VPS37BQ9H9H4 285 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 HEY2Q9UBP5 337 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 IGLV3-22A0A075B6J6 115 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 NDUFB10O96000 172 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 FDX1P10109 184 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 SLC1A1P43005 524 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 SESTD1Q86VW0 696 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 DDX1Q92499 740 aaKnown RBP20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 ZNF184Q99676 751 aaPredicted RBP20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 KCND2Q9NZV8 630 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 ZNF212Q9UDV6 495 aa20.41■□□□□ 0.86
SNAPC3-206ENST00000490969 A0A0G2JND7 137 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 FZD9O00144 591 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 ADRA1DP25100 572 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 CETN2P41208 172 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 TBC1D25Q3MII6 688 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 DAB2IPQ5VWQ8 1189 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 FBXO11Q86XK2 927 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 KBTBD2Q8IY47 623 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 SCYL3Q8IZE3 742 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 ZSWIM2Q8NEG5 633 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 DCAF4Q8WV16 495 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 PTPRN2Q92932 1015 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 NACC1Q96RE7 527 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 KRT82Q9NSB4 513 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 WRAP73Q9P2S5 460 aaPredicted RBP20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 WDR91A4D1P6 747 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 CYP3A4P08684 503 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 KRT4P19013 534 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 CLEC16AQ2KHT3 1053 aa20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 PSMC3IPQ9P2W1 217 aaPredicted RBP20.4■□□□□ 0.86
SNAPC3-206ENST00000490969 COL2A1P02458 1487 aaPredicted RBP20.39■□□□□ 0.86
SNAPC3-206ENST00000490969 PSMD10O75832 226 aa20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 ZNF280AP59817 542 aaPredicted RBP20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 GSTA3Q16772 222 aa20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 RINLQ6ZS11 566 aa20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 DAW1Q8N136 415 aa20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 XXYLT1Q8NBI6 393 aa20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 SEMA4DQ92854 862 aa20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 WDR18Q9BV38 432 aa20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 MMADHCQ9H3L0 296 aaPredicted RBP20.39■□□□□ 0.85
SNAPC3-206ENST00000490969 DNALI1O14645 258 aaPredicted RBP20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 GSTT1P30711 240 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 PIK3CAP42336 1068 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 PTP4A2Q12974 167 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 PPP2R5CQ13362 524 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 PRAMEF18Q5VWM3 479 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 PHLDB2Q86SQ0 1253 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 ITFG2Q969R8 447 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 RBM41Q96IZ5 413 aaKnown RBP20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 TRIM55Q9BYV6 548 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 OSBPL8Q9BZF1 889 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 SSU72Q9NP77 194 aaKnown RBP20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 DMAP1Q9NPF5 467 aaPredicted RBP20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 HSPBP1Q9NZL4 362 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 SLC24A2Q9UI40 661 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 HERC5Q9UII4 1024 aaKnown RBP20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 FZD1Q9UP38 647 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 UBTFL6P0CB48 400 aaPredicted RBP20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 ZNF276Q8N554 614 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 GLIS1Q8NBF1 620 aa20.38■□□□□ 0.85
SNAPC3-206ENST00000490969 AZIN2Q96A70 460 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms