RNA–Protein interactions for RNA: ENST00000490140.1

FDPS-215, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-215ENST00000490140 CSRP2Q16527 193 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 LPAL2Q16609 132 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 ITPRIPL2Q3MIP1 535 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 TMEM119Q4V9L6 283 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 GPR158Q5T848 1215 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SPATA1Q5VX52 437 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SLFN12LQ6IEE8 588 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 POTEHQ6S545 545 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 DNAJB7Q7Z6W7 309 aaPredicted RBP12.76□□□□□ -0.37
FDPS-215ENST00000490140 GPBP1Q86WP2 473 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 MYCT1Q8N699 235 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 FAM212AQ96EL1 285 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SENP8Q96LD8 212 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SEPT5Q99719 369 aaPredicted RBP12.76□□□□□ -0.37
FDPS-215ENST00000490140 DNAJC25Q9H1X3 360 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 ASB7Q9H672 318 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 KIF9Q9HAQ2 790 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 SEMA4GQ9NTN9 838 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 C2CD2Q9Y426 696 aa12.76□□□□□ -0.37
FDPS-215ENST00000490140 MEFVO15553 781 aaPredicted RBP12.75□□□□□ -0.37
FDPS-215ENST00000490140 TRAK2O60296 914 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 CYP11A1P05108 521 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 AVPR1AP37288 418 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 POU5F1Q01860 360 aaKnown RBP12.75□□□□□ -0.37
FDPS-215ENST00000490140 SPAG1Q07617 926 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 MGAT5BQ3V5L5 792 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 RALGAPA1Q6GYQ0 2036 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 SPPL2BQ8TCT7 592 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 ZNF560Q96MR9 790 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 REEP2Q9BRK0 252 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 LRRC3Q9BY71 257 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 TASP1Q9H6P5 420 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 CHD8Q9HCK8 2581 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 SLC27A5Q9Y2P5 690 aa12.75□□□□□ -0.37
FDPS-215ENST00000490140 TSC2P49815 1807 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 A0A0B4J269 797 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 CCDC163A0A0D9SF12 145 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.74□□□□□ -0.37
FDPS-215ENST00000490140 SOBPA7XYQ1 873 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 CHURC1-FNTBB4DL54 471 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 ADRB2P07550 413 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 TGM1P22735 817 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 PNPLA4P41247 253 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 TNFSF9P41273 254 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 FNTBP49356 437 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 TAF6P49848 677 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 ZNF131P52739 623 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 TSPY1Q01534 308 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 GRSF1Q12849 480 aaKnown RBP eCLIP12.74□□□□□ -0.37
FDPS-215ENST00000490140 BFSP1Q12934 665 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 IL17AQ16552 155 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 SV2CQ496J9 727 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 SLC39A12Q504Y0 691 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 C9orf57Q5W0N0 161 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 IL31Q6EBC2 164 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 JADE1Q6IE81 842 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 GAREM2Q75VX8 874 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 WDR5BQ86VZ2 330 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 NT5DC4Q86YG4 428 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 DCP1BQ8IZD4 617 aaKnown RBP12.74□□□□□ -0.37
FDPS-215ENST00000490140 C12orf50Q8NA57 414 aaPredicted RBP12.74□□□□□ -0.37
FDPS-215ENST00000490140 ATAD1Q8NBU5 361 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 LOXL4Q96JB6 756 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 CNTNAP3BQ96NU0 1288 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 PNMA5Q96PV4 448 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 CNTNAP3Q9BZ76 1288 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 PARD6AQ9NPB6 346 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.74□□□□□ -0.37
FDPS-215ENST00000490140 SPAG17Q6Q759 2223 aa12.74□□□□□ -0.37
FDPS-215ENST00000490140 CNOT1A5YKK6 2376 aaKnown RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 FAM189A1O60320 539 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 VNN2O95498 520 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 ADRB1P08588 477 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 LONP1P36776 959 aaKnown RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 CCINQ13939 588 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 POSTNQ15063 836 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 PON2Q15165 354 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 RABEP1Q15276 862 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 PPM1JQ5JR12 505 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 STXBP5Q5T5C0 1151 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 HEATR6Q6AI08 1181 aaKnown RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 ADALQ6DHV7 355 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 CC2D1AQ6P1N0 951 aaPredicted RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 KRI1Q8N9T8 703 aaKnown RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 CCDC26Q8TAB7 109 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 HVCN1Q96D96 273 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 TMEM209Q96SK2 561 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 PLIN2Q99541 437 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 CRISPLD1Q9H336 500 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 ZHX3Q9H4I2 956 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 RBM12Q9NTZ6 932 aaKnown RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 GTSE1Q9NYZ3 720 aa12.73□□□□□ -0.37
FDPS-215ENST00000490140 UXTQ9UBK9 157 aaPredicted RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 CPSF3Q9UKF6 684 aaKnown RBP12.73□□□□□ -0.37
FDPS-215ENST00000490140 TCHHQ07283 1943 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms