RNA–Protein interactions for RNA: ENST00000488298.5

COL1A2-210, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 594 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-210ENST00000488298 KNOP1Q1ED39 458 aaKnown RBP13.04□□□□□ -0.32
COL1A2-210ENST00000488298 UVSSAQ2YD98 709 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 SLC44A4Q53GD3 710 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 C9orf57Q5W0N0 161 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 ARMCX5Q6P1M9 558 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 STXBP4Q6ZWJ1 553 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 NT5DC4Q86YG4 428 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 CBWD2Q8IUF1 395 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 SYCP3Q8IZU3 236 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 GPD1LQ8N335 351 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 FGF13Q92913 245 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 TIGD1Q96MW7 591 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 HINFPQ9BQA5 517 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 HSPBP1Q9NZL4 362 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 METRNQ9UJH8 293 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 BACE2Q9Y5Z0 518 aa13.04□□□□□ -0.32
COL1A2-210ENST00000488298 SYN3O14994 580 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 OR1D2P34982 312 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 LILRA4P59901 499 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 RAB33AQ14088 237 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 TMEM132DQ14C87 1099 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 SLC8B1Q6J4K2 584 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 RTL10Q7L3V2 364 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 SLC9A9Q8IVB4 645 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 KIAA2013Q8IYS2 634 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 HS6ST3Q8IZP7 471 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 C1orf127Q8N9H9 656 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 ITFG1Q8TB96 612 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 SLC7A14Q8TBB6 771 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 PLEKHO2Q8TD55 490 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 EXOC1Q9NV70 894 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 RBAKQ9NYW8 714 aaPredicted RBP13.03□□□□□ -0.32
COL1A2-210ENST00000488298 CGNQ9P2M7 1197 aaKnown RBP13.03□□□□□ -0.32
COL1A2-210ENST00000488298 SIX4Q9UIU6 781 aa13.03□□□□□ -0.32
COL1A2-210ENST00000488298 DMDP11532 3685 aa13.02□□□□□ -0.32
COL1A2-210ENST00000488298 CLIC2O15247 247 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 XPOTO43592 962 aaKnown RBP13.02□□□□□ -0.33
COL1A2-210ENST00000488298 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 LRRN2O75325 713 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 ABLIM3O94929 683 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 OAZ2O95190 189 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 ANP32AP39687 249 aaKnown RBP13.02□□□□□ -0.33
COL1A2-210ENST00000488298 PFKPQ01813 784 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 PRKCQQ04759 706 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 PNOCQ13519 176 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 MLF2Q15773 248 aaPredicted RBP13.02□□□□□ -0.33
COL1A2-210ENST00000488298 ZCWPW2Q504Y3 356 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 VARS2Q5ST30 1063 aaKnown RBP13.02□□□□□ -0.33
COL1A2-210ENST00000488298 BEST2Q8NFU1 509 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 RUBCNQ92622 972 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 RMDN1Q96DB5 314 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 BCO2Q9BYV7 579 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 DPP3Q9NY33 737 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 DNMT3BQ9UBC3 853 aaKnown RBP13.02□□□□□ -0.33
COL1A2-210ENST00000488298 TRAF3IP3Q9Y228 551 aa13.02□□□□□ -0.33
COL1A2-210ENST00000488298 SPTBN4Q9H254 2564 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 ZNF233A6NK53 670 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 FAM170BA6NMN3 283 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 PDXKO00764 312 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 LAMTOR5O43504 91 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 KINO60870 393 aaKnown RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 VNN2O95498 520 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 CYP11A1P05108 521 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 POU2F2P09086 479 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 C7P10643 843 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 PAX3P23760 479 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 CLDN10P78369 228 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 UBXN2BQ14CS0 331 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 SNRNP35Q16560 246 aaKnown RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 NFIL3Q16649 462 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 PABPC1LQ4VXU2 614 aaKnown RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 ANKS3Q6ZW76 656 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 LIMS2Q7Z4I7 341 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 MAML2Q8IZL2 1156 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 GUF1Q8N442 669 aaKnown RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 EFCAB3Q8N7B9 438 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 XXYLT1Q8NBI6 393 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 ZNF516Q92618 1163 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 ERCC4Q92889 916 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 OSBPL6Q9BZF3 934 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 KIAA1586Q9HCI6 787 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 SPATA6Q9NWH7 488 aaPredicted RBP13.01□□□□□ -0.33
COL1A2-210ENST00000488298 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 FBXL5Q9UKA1 691 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 PCDHA5Q9Y5H7 936 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 CDY1Q9Y6F8 540 aa13.01□□□□□ -0.33
COL1A2-210ENST00000488298 PTPRDP23468 1912 aa13□□□□□ -0.33
COL1A2-210ENST00000488298 WDR27A2RRH5 827 aa13□□□□□ -0.33
COL1A2-210ENST00000488298 TYMPP19971 482 aa13□□□□□ -0.33
COL1A2-210ENST00000488298 BMP6P22004 513 aa13□□□□□ -0.33
COL1A2-210ENST00000488298 MCM4P33991 863 aa13□□□□□ -0.33
COL1A2-210ENST00000488298 ROR1Q01973 937 aa13□□□□□ -0.33
COL1A2-210ENST00000488298 CYP24A1Q07973 514 aa13□□□□□ -0.33
COL1A2-210ENST00000488298 MYBPC2Q14324 1141 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms