RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ZNF503Q96F45 646 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 SUCLG2Q96I99 432 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 ALOXE3Q9BYJ1 711 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 TRIM54Q9BYV2 358 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 KIAA1586Q9HCI6 787 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 PLEKHM1Q9Y4G2 1056 aa4.78□□□□□ -1.64
ECHDC1-217ENST00000488087 BTN3A1O00481 513 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 TBX3O15119 743 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 FRS3O43559 492 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 DNAJB5O75953 348 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 PIM1P11309 404 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 MYF5P13349 255 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 KCNA2P16389 499 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 EN2P19622 333 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 SUMO3P55854 103 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 POU6F2P78424 691 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 GUCY1B3Q02153 619 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 FPGSQ05932 587 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 SLC13A2Q13183 592 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 PUM1Q14671 1186 aaKnown RBP eCLIP4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 SLC44A4Q53GD3 710 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 FAM160B1Q5W0V3 765 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 LMBRD2Q68DH5 695 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 CLNKQ7Z7G1 428 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 PJA1Q8NG27 643 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 TMEM125Q96AQ2 219 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 APIPQ96GX9 242 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 TTYH3Q9C0H2 523 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 NUP62CLQ9H1M0 184 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 ZNF287Q9HBT7 754 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 ARNT2Q9HBZ2 717 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 GALNT9Q9HCQ5 603 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 SACM1LQ9NTJ5 587 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 MRPS18AQ9NVS2 196 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 CPNE7Q9UBL6 633 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 FZD1Q9UP38 647 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 TMX2Q9Y320 296 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 NEU2Q9Y3R4 380 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 SNX13Q9Y5W8 968 aa4.77□□□□□ -1.65
ECHDC1-217ENST00000488087 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 ISM1B1AKI9 464 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 MYO1FO00160 1098 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 APAF1O14727 1248 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 PMM2O15305 246 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 LPXNO60711 386 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 ABHD16AO95870 558 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 FOSP01100 380 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 THP07101 528 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 BMPR1AP36894 532 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 RPS7P62081 194 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 PICALMQ13492 652 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 RAB32Q13637 225 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 CNGA2Q16280 664 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 CYP2A13Q16696 494 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 GEN1Q17RS7 908 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 ZXDCQ2QGD7 858 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 CD300EQ496F6 205 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 ARMC6Q6NXE6 501 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 KCNV1Q6PIU1 500 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 LAYNQ6UX15 382 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 COLGALT2Q8IYK4 626 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 SLC15A4Q8N697 577 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 DNAJC5GQ8N7S2 189 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 PSD4Q8NDX1 1056 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 PROKR1Q8TCW9 393 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 ZNF483Q8TF39 744 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 GPRC5BQ9NZH0 403 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 VSX1Q9NZR4 365 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 CTTNBP2NLQ9P2B4 639 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 ANKFY1Q9P2R3 1169 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 MYRFQ9Y2G1 1151 aa4.76□□□□□ -1.65
ECHDC1-217ENST00000488087 TRGV11A0A075B6L2 103 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 PRAMEF33A0A0G2JMD5 474 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 CENPVL1A0A0U1RR11 272 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MYADML2A6NDP7 307 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 TMEM200CA6NKL6 621 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MARCH11A6NNE9 402 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 RHPN2P1A8MT19 583 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 NPIPB8E9PQR5 432 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 PRAMEF10O60809 474 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 SUN1O94901 812 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MYL3P08590 195 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 PHKG2P15735 406 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 ITGALP20701 1170 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MAKP20794 623 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 ZFP36P26651 326 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 SLC11A2P49281 568 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 ANXA11P50995 505 aaKnown RBP4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 ARFIP2P53365 341 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 UCP3P55916 312 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MC2RQ01718 297 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 FMO1Q01740 532 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 SATB1Q01826 763 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 CTBP1Q13363 440 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 HDAC1Q13547 482 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 MAP9Q49MG5 647 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 LY6G5CQ5SRR4 150 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 TAF2Q6P1X5 1199 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 PPP1R32Q7Z5V6 425 aa4.75□□□□□ -1.65
ECHDC1-217ENST00000488087 FBXO41Q8TF61 875 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 359.3 ms