RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PEX11BO96011 259 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 BPIP17213 487 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 LGALS4P56470 323 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 MRPL49Q13405 166 aaKnown RBP6.01□□□□□ -1.45
BRCA1-217ENST00000487825 PDCD1Q15116 288 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 DHCR24Q15392 516 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 CCDC178Q5BJE1 867 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 TAF7LQ5H9L4 462 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 CRB2Q5IJ48 1285 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 ZNF790Q6PG37 636 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 HTR3DQ70Z44 454 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 ZNF627Q7L945 461 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 RNF180Q86T96 592 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 RBM17Q96I25 401 aaKnown RBP6.01□□□□□ -1.45
BRCA1-217ENST00000487825 NYXQ9GZU5 481 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 TMX4Q9H1E5 349 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-217ENST00000487825 WNT8AQ9H1J5 351 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 IKZF4Q9H2S9 585 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 KCTD10Q9H3F6 313 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 TOPORSQ9NS56 1045 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-217ENST00000487825 GPRC5BQ9NZH0 403 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 STAP2Q9UGK3 403 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 TRPS1Q9UHF7 1281 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 SORCS3Q9UPU3 1222 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 HDAC5Q9UQL6 1122 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 RTL9Q8NET4 1388 aa6.01□□□□□ -1.45
BRCA1-217ENST00000487825 COL2A1P02458 1487 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-217ENST00000487825 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6□□□□□ -1.45
BRCA1-217ENST00000487825 TLDC2A0PJX2 215 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 MANSC4A6NHS7 340 aaPredicted RBP6□□□□□ -1.45
BRCA1-217ENST00000487825 DNAJC6O75061 913 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 TNNT2P45379 298 aaPredicted RBP6□□□□□ -1.45
BRCA1-217ENST00000487825 GZMKP49863 264 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 PTTG1IPP53801 180 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 INHBEP58166 350 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 SP3Q02447 781 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 DPTQ07507 201 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 SULT6B1Q6IMI4 303 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 STRA8Q7Z7C7 330 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 XYLT1Q86Y38 959 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 THNSL2Q86YJ6 484 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 SLC41A1Q8IVJ1 513 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 ZNF276Q8N554 614 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 AMER2Q8N7J2 671 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 CLRN3Q8NCR9 226 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 CPT1CQ8TCG5 803 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 SLC25A43Q8WUT9 341 aaPredicted RBP6□□□□□ -1.45
BRCA1-217ENST00000487825 RSAD2Q8WXG1 361 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 EAF2Q96CJ1 260 aaPredicted RBP6□□□□□ -1.45
BRCA1-217ENST00000487825 GUCD1Q96NT3 240 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 TTC1Q99614 292 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 GDF15Q99988 308 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 CPEB1Q9BZB8 566 aaKnown RBP6□□□□□ -1.45
BRCA1-217ENST00000487825 IFT22Q9H7X7 185 aa6□□□□□ -1.45
BRCA1-217ENST00000487825 ABCC4O15439 1325 aa5.99□□□□□ -1.45
BRCA1-217ENST00000487825 SCAF4O95104 1147 aaKnown RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 LTA4HP09960 611 aaKnown RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 PIP4K2AP48426 406 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 HLFQ16534 295 aa5.99□□□□□ -1.45
BRCA1-217ENST00000487825 DCAF17Q5H9S7 520 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 GIMAP6Q6P9H5 292 aa5.99□□□□□ -1.45
BRCA1-217ENST00000487825 ABHD15Q6UXT9 468 aa5.99□□□□□ -1.45
BRCA1-217ENST00000487825 FAM83AQ86UY5 434 aa5.99□□□□□ -1.45
BRCA1-217ENST00000487825 GLB1L3Q8NCI6 653 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 FAM193BQ96PV7 902 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 CEP89Q96ST8 783 aa5.99□□□□□ -1.45
BRCA1-217ENST00000487825 LSM14BQ9BX40 385 aaKnown RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 SLKQ9H2G2 1235 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-217ENST00000487825 CDY2AQ9Y6F7 541 aa5.99□□□□□ -1.45
BRCA1-217ENST00000487825 GRXCR1A8MXD5 290 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 ZEB2O60315 1214 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 INHBCP55103 352 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 ZNF280AP59817 542 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-217ENST00000487825 ARHGEF6Q15052 776 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 UGT8Q16880 541 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 NAIF1Q69YI7 327 aaPredicted RBP5.98□□□□□ -1.45
BRCA1-217ENST00000487825 LDLRAD3Q86YD5 345 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 OR52N2Q8NGI0 321 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 HAS1Q92839 578 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 DPP7Q9UHL4 492 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 EIF2B4Q9UI10 523 aaKnown RBP5.98□□□□□ -1.45
BRCA1-217ENST00000487825 BDP1A6H8Y1 2624 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 UBN2Q6ZU65 1347 aa5.98□□□□□ -1.45
BRCA1-217ENST00000487825 DDX60LQ5H9U9 1706 aaKnown RBP5.97□□□□□ -1.45
BRCA1-217ENST00000487825 A0A087X1B8 175 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 TMEM127O75204 238 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 HSP90B1P14625 803 aaKnown RBP5.97□□□□□ -1.45
BRCA1-217ENST00000487825 GYPEP15421 78 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 PTGS2P35354 604 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 WNT3AP56704 352 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 SESN3P58005 492 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 APBA1Q02410 837 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 FAM109BQ6ICB4 259 aaPredicted RBP5.97□□□□□ -1.45
BRCA1-217ENST00000487825 MRGPREQ86SM8 312 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 CMIPQ8IY22 773 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 TDHQ8IZJ6 230 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 CDC5LQ99459 802 aaKnown RBP5.97□□□□□ -1.45
BRCA1-217ENST00000487825 DBNDD1Q9H9R9 158 aa5.97□□□□□ -1.45
BRCA1-217ENST00000487825 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.97□□□□□ -1.45
BRCA1-217ENST00000487825 USP16Q9Y5T5 823 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms