RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 ZBED1O96006 694 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 CFIP05156 583 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 CHN2P52757 468 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 OS9Q13438 667 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 GRM3Q14832 879 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 BRD3Q15059 726 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 KIAA0753Q2KHM9 967 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 ATXN7L2Q5T6C5 722 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZNF529Q6P280 563 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 SEM1Q6ZVN7 128 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 SH2D3CQ8N5H7 860 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 FBXO18Q8NFZ0 1043 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 OR56A1Q8NGH5 318 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 STON2Q8WXE9 905 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 CEP95Q96GE4 821 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 MRGPRX4Q96LA9 322 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZNF778Q96MU6 729 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 VRK1Q99986 396 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 B3GNT5Q9BYG0 378 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 KLK15Q9H2R5 256 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 PNPOQ9NVS9 261 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 RLIMQ9NVW2 624 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 GABBR1Q9UBS5 961 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 ATP11BQ9Y2G3 1177 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 PAXBP1Q9Y5B6 917 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 PCDHA3Q9Y5H8 950 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 ACTL7AQ9Y615 435 aa4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 ARHGEF17Q96PE2 2063 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P36-201ENST00000487709 CXorf49A8MYA2 514 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 PHGDHO43175 533 aaKnown RBP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 ANXA1P04083 346 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 HRGP04196 525 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 AMY1AP04745 511 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 ALDH2P05091 517 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 TYRP14679 529 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 PHKG2P15735 406 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 PCSK1P29120 753 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 KCNJ5P48544 419 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 PIK3CGP48736 1102 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 RARRES1P49788 294 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 RAB1AP62820 205 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 DSC2Q02487 901 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 SRSF4Q08170 494 aaKnown RBP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 HABP2Q14520 560 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 SAFBQ15424 915 aaKnown RBP eCLIP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 BMT2Q1RMZ1 405 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 SPDYE7PQ495Y7 208 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 FLYWCH1Q4VC44 716 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 SLC44A4Q53GD3 710 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 DACT2Q5SW24 774 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 ARMC6Q6NXE6 501 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 CHST15Q7LFX5 561 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 FBXO41Q8TF61 875 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 DDX17Q92841 729 aaKnown RBP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 RNF31Q96EP0 1072 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 SARGQ9BW04 601 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 ALOXE3Q9BYJ1 711 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 LRRC27Q9C0I9 530 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 PIH1D1Q9NWS0 290 aaKnown RBP4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 LRIT1Q9P2V4 623 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 NOX1Q9Y5S8 564 aa4.67□□□□□ -1.66
HMGB1P36-201ENST00000487709 A0A088AWK7 358 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 CFAP69A5D8W1 941 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 FOXN3O00409 490 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 TPP1O14773 563 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 IKBKBO14920 756 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 GRM6O15303 877 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ELANEP08246 267 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 TRIM27P14373 513 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 RHCEP18577 417 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 RPL17P18621 184 aaKnown RBP4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 FPR1P21462 350 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 AGFG1P52594 562 aaKnown RBP4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 CACNA2D1P54289 1103 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 MRPS35P82673 323 aaKnown RBP4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ATP8B2P98198 1209 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 SATB1Q01826 763 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 RHDQ02161 417 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 POLD3Q15054 466 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 COBLL1Q53SF7 1204 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 KHDC1LQ5JSQ8 128 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 MFSD14BQ5SR56 506 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 AGAP9Q5VTM2 703 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 NPNTQ6UXI9 565 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 MAEAQ7L5Y9 396 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 OVCH2Q7RTZ1 564 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 MAPKAPK5Q8IW41 473 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZGPATQ8N5A5 531 aaKnown RBP4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 FITM2Q8N6M3 262 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 C9orf106Q8NAJ2 232 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 PPP1R35Q8TAP8 253 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ACTRT2Q8TDY3 377 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 LRTOMTQ8WZ04 291 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ANKS1AQ92625 1134 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 SUCLG2Q96I99 432 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ZSWIM1Q9BR11 485 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 NUP62CLQ9H1M0 184 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 BRD9Q9H8M2 597 aa4.66□□□□□ -1.66
HMGB1P36-201ENST00000487709 ARMT1Q9H993 441 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms