RNA–Protein interactions for RNA: ENST00000487539.1

CNN3-206, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-206ENST00000487539 MAML3Q96JK9 1138 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 PRRX2Q99811 253 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 KLC2Q9H0B6 622 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 MTIF3Q9H2K0 278 aaKnown RBP5.35□□□□□ -1.55
CNN3-206ENST00000487539 HIPK3Q9H422 1215 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 DNAJC18Q9H819 358 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 SMURF1Q9HCE7 757 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 ARHGAP20Q9P2F6 1191 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 ARHGAP28Q9P2N2 729 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 FTSJ1Q9UET6 329 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 COQ6Q9Y2Z9 468 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 FLNBO75369 2602 aaKnown RBP5.35□□□□□ -1.55
CNN3-206ENST00000487539 MYH13Q9UKX3 1938 aa5.35□□□□□ -1.55
CNN3-206ENST00000487539 SLC12A8A0AV02 714 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 ESYT3A0FGR9 886 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 FAM90A27PA6NNH2 459 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 ZNF839A8K0R7 811 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 CTAGE5O15320 804 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 OPA1O60313 960 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 HIP1RO75146 1068 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 ASMTLO95671 621 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 DDX58O95786 925 aaKnown RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 CYP1A1P04798 512 aaPredicted RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 ASGR1P07306 291 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 PFKPQ01813 784 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 SMAD2Q15796 467 aaKnown RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 ARHGAP44Q17R89 818 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 SKIDA1Q1XH10 827 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 TCTN1Q2MV58 587 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 TMEM177Q53S58 311 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 TAF7LQ5H9L4 462 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 MCTP2Q6DN12 878 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 TRMT10BQ6PF06 316 aaKnown RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 BORAQ6PGQ7 559 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 CATSPERGQ6ZRH7 1159 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 OVCH1Q7RTY7 1134 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 NOP9Q86U38 636 aaKnown RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 IGSF22Q8N9C0 903 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 KLHDC4Q8TBB5 520 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 ACER1Q8TDN7 264 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 ZNF384Q8TF68 577 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 NKD2Q969F2 451 aaPredicted RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 KAZALD1Q96I82 304 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 LCORQ96JN0 433 aaPredicted RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 CDK5RAP1Q96SZ6 601 aaKnown RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 TMEM168Q9H0V1 697 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 KANSL2Q9H9L4 492 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 INTS7Q9NVH2 962 aaKnown RBP5.34□□□□□ -1.55
CNN3-206ENST00000487539 WASF3Q9UPY6 502 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 INVSQ9Y283 1065 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 SIPA1L1O43166 1804 aa5.34□□□□□ -1.55
CNN3-206ENST00000487539 ELP1O95163 1332 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 A0A0U1RQG5 324 aaPredicted RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 PRAMEF25A6NGN4 478 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 MROH6A6NGR9 719 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 C19orf81C9J6K1 198 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 B4GALT4O60513 344 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 ZNF853P0CG23 659 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 CYP2C9P11712 490 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 FGFR2P21802 821 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 BTDP43251 543 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 ATXN1P54253 815 aaKnown RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 MLLT6P55198 1093 aaPredicted RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 CCNA1P78396 465 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 BEX3Q00994 111 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 NEXNQ0ZGT2 675 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 CCDC57Q2TAC2 916 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 CAVIN4Q5BKX8 364 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 TCEAL5Q5H9L2 206 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 ZCCHC8Q6NZY4 707 aaKnown RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 C16orf86Q6ZW13 317 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 UBE2R2Q712K3 238 aaPredicted RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 DCLK2Q8N568 766 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 TMEM105Q8N8V8 129 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 TXNDC5Q8NBS9 432 aaKnown RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 NUP133Q8WUM0 1156 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 CHFRQ96EP1 664 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 YTHDC1Q96MU7 727 aaKnown RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 CLUHP3Q96NS8 147 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 C17orf80Q9BSJ5 609 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 AS3MTQ9HBK9 375 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 KCNH7Q9NS40 1196 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 MAGEC2Q9UBF1 373 aaPredicted RBP5.33□□□□□ -1.56
CNN3-206ENST00000487539 ZFP69BQ9UJL9 534 aa5.33□□□□□ -1.56
CNN3-206ENST00000487539 LINC01553A4QN01 128 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 PPP1R12AO14974 1030 aaPredicted RBP5.32□□□□□ -1.56
CNN3-206ENST00000487539 MBTPS2O43462 519 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 SNAI1O95863 264 aaPredicted RBP5.32□□□□□ -1.56
CNN3-206ENST00000487539 C4BPAP04003 597 aaKnown RBP5.32□□□□□ -1.56
CNN3-206ENST00000487539 ERVK-21P61565 698 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 PSMC6P62333 389 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 DEFB103AP81534 67 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 METTL24Q5JXM2 366 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 KIAA1755Q5JYT7 1200 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 ABHD17CQ6PCB6 329 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 CXCL17Q6UXB2 119 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 NOSTRINQ8IVI9 506 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 PALM2Q8IXS6 379 aa5.32□□□□□ -1.56
CNN3-206ENST00000487539 RPUSD2Q8IZ73 545 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms