RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 TTPALQ9BTX7 342 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 HERC2P3Q9BVR0 1158 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 GPR88Q9GZN0 384 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 SNX25Q9H3E2 840 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 SLC28A3Q9HAS3 691 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 MTUS1Q9ULD2 1270 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 CAPN11Q9UMQ6 739 aa18.79■□□□□ 0.6
CHMP3-207ENST00000485465 RNF225M0QZC1 329 aaPredicted RBP18.78■□□□□ 0.6
CHMP3-207ENST00000485465 FOXN3O00409 490 aaPredicted RBP18.78■□□□□ 0.6
CHMP3-207ENST00000485465 GABRDO14764 452 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 GNL1P36915 607 aaPredicted RBP18.78■□□□□ 0.6
CHMP3-207ENST00000485465 LHX1P48742 406 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 INCA1Q0VD86 236 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 USP41Q3LFD5 358 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 SMYD5Q6GMV2 418 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 OVOS1Q6IE37 1185 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 CEP57Q86XR8 500 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 OR6B3Q8NGW1 331 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 TIFAQ96CG3 184 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 B3GALT6Q96L58 329 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 SPAG5Q96R06 1193 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 CHST7Q9NS84 486 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 PUF60Q9UHX1 559 aaKnown RBP18.78■□□□□ 0.6
CHMP3-207ENST00000485465 BARX2Q9UMQ3 279 aaPredicted RBP18.78■□□□□ 0.6
CHMP3-207ENST00000485465 CNTN6Q9UQ52 1028 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 LZTS1Q9Y250 596 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 PCDHB4Q9Y5E5 795 aa18.78■□□□□ 0.6
CHMP3-207ENST00000485465 F8VZ95 297 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 CILPO75339 1184 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 OAZ2O95190 189 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 TPM1P09493 284 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 CASP14P31944 242 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 FXR1P51114 621 aaKnown RBP eCLIP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 NDST1P52848 882 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 ZBED6P86452 979 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 YWHAHQ04917 246 aaPredicted RBP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 MRPL58Q14197 206 aaKnown RBP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 RTP2Q5QGT7 225 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 VARS2Q5ST30 1063 aaKnown RBP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 VPS52Q8N1B4 723 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 SPC24Q8NBT2 197 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 FBXO22Q8NEZ5 403 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 ZNF397Q8NF99 534 aaPredicted RBP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 SPPL3Q8TCT6 385 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 WHAMMQ8TF30 809 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 C11orf84Q9BUA3 381 aaPredicted RBP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 ALG13Q9NP73 1137 aaKnown RBP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 MYO6Q9UM54 1294 aa18.77■□□□□ 0.6
CHMP3-207ENST00000485465 LUC7L2Q9Y383 392 aaKnown RBP18.77■□□□□ 0.6
CHMP3-207ENST00000485465 PNMA6AP0CW24 399 aaPredicted RBP18.76■□□□□ 0.59
CHMP3-207ENST00000485465 KRT5P13647 590 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 LMO2P25791 158 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 USP8P40818 1118 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 STAT1P42224 750 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 DSG1Q02413 1049 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 UBE3AQ05086 875 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 KIAA1841Q6NSI8 718 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 PDXDC1Q6P996 788 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 TMEM270Q6UE05 265 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 UNC93AQ86WB7 457 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 FAM71AQ8IYT1 594 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 THEM5Q8N1Q8 247 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 RTP3Q9BQQ7 232 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 CERS4Q9HA82 394 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 DDX43Q9NXZ2 648 aaKnown RBP18.76■□□□□ 0.59
CHMP3-207ENST00000485465 IMPACTQ9P2X3 320 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 HMGXB4Q9UGU5 601 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 STXBP5LQ9Y2K9 1186 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 NME7Q9Y5B8 376 aa18.76■□□□□ 0.59
CHMP3-207ENST00000485465 LRRC53A6NM62 1247 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 A8MXQ7 604 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 H3BNC9 293 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 H7C4K7 107 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 HCRTO43612 131 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 PDGFRBP09619 1106 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 KRT9P35527 623 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 SOX5P35711 763 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 GLUD2P49448 558 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 ZNF132P52740 706 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 GPM6BQ13491 265 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 ZNF394Q53GI3 561 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 KIAA0319Q5VV43 1072 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 ANKS3Q6ZW76 656 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 RBBP8NLQ8NC74 664 aaPredicted RBP18.75■□□□□ 0.59
CHMP3-207ENST00000485465 LNX1Q8TBB1 728 aaPredicted RBP18.75■□□□□ 0.59
CHMP3-207ENST00000485465 POF1BQ8WVV4 589 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 RIN2Q8WYP3 895 aaPredicted RBP18.75■□□□□ 0.59
CHMP3-207ENST00000485465 PIK3R5Q8WYR1 880 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 TWNKQ96RR1 684 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 NT5C1AQ9BXI3 368 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 ELOVL4Q9GZR5 314 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 ZBP1Q9H171 429 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 NUCKS1Q9H1E3 243 aaKnown RBP18.75■□□□□ 0.59
CHMP3-207ENST00000485465 NLRC5Q86WI3 1866 aa18.75■□□□□ 0.59
CHMP3-207ENST00000485465 AKR1B15C9JRZ8 316 aaPredicted RBP18.74■□□□□ 0.59
CHMP3-207ENST00000485465 GRM6O15303 877 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 CYP26A1O43174 497 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 URODP06132 367 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 CTSAP10619 480 aa18.74■□□□□ 0.59
CHMP3-207ENST00000485465 PCSK1P29120 753 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms