RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 ESPNB1AK53 854 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 NRDCO43847 1150 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 AKR1B10O60218 316 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 P4HA1P13674 534 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 BRD2P25440 801 aaKnown RBP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 GNA15P30679 374 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 PDE6CP51160 858 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 FAM117BQ6P1L5 589 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 REXO1L1PQ8IX06 675 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 RPUSD2Q8IZ73 545 aaKnown RBP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 CCAR2Q8N163 923 aaKnown RBP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 ZNF689Q96CS4 500 aaPredicted RBP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 SENP8Q96LD8 212 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 DPEP3Q9H4B8 488 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 MARCH5Q9NX47 278 aa15.52■□□□□ 0.08
LRIF1-202ENST00000485275 BARX2Q9UMQ3 279 aaPredicted RBP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 PRG3Q9Y2Y8 225 aaPredicted RBP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 TIMM13Q9Y5L4 95 aaPredicted RBP15.52■□□□□ 0.08
LRIF1-202ENST00000485275 CCDC85CA6NKD9 419 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 BAIAP3O94812 1187 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 LMO2P25791 158 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 CYLC1P35663 651 aaPredicted RBP15.52■□□□□ 0.07
LRIF1-202ENST00000485275 CDR2Q01850 454 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 RNASELQ05823 741 aaKnown RBP15.52■□□□□ 0.07
LRIF1-202ENST00000485275 PPIGQ13427 754 aaKnown RBP eCLIP15.52■□□□□ 0.07
LRIF1-202ENST00000485275 TMEM240Q5SV17 173 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 WSCD1Q658N2 575 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 BCL7CQ8WUZ0 217 aaPredicted RBP15.52■□□□□ 0.07
LRIF1-202ENST00000485275 PPP1R13BQ96KQ4 1090 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 UROC1Q96N76 676 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 LPIN3Q9BQK8 851 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.52■□□□□ 0.07
LRIF1-202ENST00000485275 PACSIN1Q9BY11 444 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 KANSL3Q9P2N6 904 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 NAGPAQ9UK23 515 aa15.52■□□□□ 0.07
LRIF1-202ENST00000485275 CYB561D2O14569 222 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 HOXA2O43364 376 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 TACC1O75410 805 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 OR1G1P47890 313 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 SLC11A1P49279 550 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 BMS1Q14692 1282 aaKnown RBP15.51■□□□□ 0.07
LRIF1-202ENST00000485275 KIAA0319Q5VV43 1072 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 FMNL3Q8IVF7 1028 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 ADGRF2Q8IZF7 708 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 LRRC43Q8N309 656 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 TOP6BLQ8N6T0 577 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 DDX27Q96GQ7 796 aaKnown RBP15.51■□□□□ 0.07
LRIF1-202ENST00000485275 CWH43Q9H720 699 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 KCND1Q9NSA2 647 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 TRIM10Q9UDY6 481 aa15.51■□□□□ 0.07
LRIF1-202ENST00000485275 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.51■□□□□ 0.07
LRIF1-202ENST00000485275 TMEM189-UBE2V1I3L0A0 370 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 NRP1O14786 923 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 AMHP03971 560 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 CCDC172P0C7W6 258 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 ARHGAP25P42331 645 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 DCLRE1AQ6PJP8 1040 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 C12orf29Q8N999 325 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 APPL2Q8NEU8 664 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 ZNF606Q8WXB4 792 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 RSPH1Q8WYR4 309 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 TMEM176AQ96HP8 235 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 RTP3Q9BQQ7 232 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 HTATIP2Q9BUP3 242 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 LACRTQ9GZZ8 138 aa15.5■□□□□ 0.07
LRIF1-202ENST00000485275 NT5C1B-RDH14C9J2C7 533 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 M0QZQ0 153 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 GABRDO14764 452 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 THAP12O43422 761 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 HUS1O60921 280 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 CCDC175P0C221 793 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 WARSP23381 471 aaKnown RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 YWHAEP62258 255 aaKnown RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 PASD1Q8IV76 773 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 OR6B3Q8NGW1 331 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 MRPL9Q9BYD2 267 aaKnown RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 STXBP5LQ9Y2K9 1186 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 EFCAB14O75071 495 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 FGBP02675 491 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 GALTP07902 379 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 PAEPP09466 180 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 ACAT1P24752 427 aaKnown RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 ANXA13P27216 316 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 BCAR1P56945 870 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 ALKBH5Q6P6C2 394 aaKnown RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 DSTYKQ6XUX3 929 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 ACOT1Q86TX2 421 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 SUSD3Q96L08 255 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 FAM193BQ96PV7 902 aaPredicted RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 NT5C1AQ9BXI3 368 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 FAM124BQ9H5Z6 455 aaPredicted RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 SEPT11Q9NVA2 429 aaKnown RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 PUF60Q9UHX1 559 aaKnown RBP15.49■□□□□ 0.07
LRIF1-202ENST00000485275 PCDHA13Q9Y5I0 950 aa15.49■□□□□ 0.07
LRIF1-202ENST00000485275 CDH23Q9H251 3354 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 ZBBXA8MT70 800 aa15.48■□□□□ 0.07
LRIF1-202ENST00000485275 ATP2C2O75185 946 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms