RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SLC27A5Q9Y2P5 690 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 NUP210Q8TEM1 1887 aaPredicted RBP12.39□□□□□ -0.43
SCFD1-206ENST00000484733 TICRRQ7Z2Z1 1910 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 FRMD3A2A2Y4 597 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 TISP43B9A030 160 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 CYB561D2O14569 222 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 SYT1P21579 422 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ADSSP30520 456 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ID4P47928 161 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 FCHO2Q0JRZ9 810 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 ALCAMQ13740 583 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 OR10T2Q8NGX3 314 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 POMGNT1Q8WZA1 660 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 FAM3CQ92520 227 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 RUBCNQ92622 972 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 MKNK1Q9BUB5 465 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 C8orf33Q9H7E9 229 aaPredicted RBP12.39□□□□□ -0.43
SCFD1-206ENST00000484733 OLFML3Q9NRN5 406 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 NCANO14594 1321 aa12.39□□□□□ -0.43
SCFD1-206ENST00000484733 A0A1W2PRU2 124 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 LDHAP00338 332 aaKnown RBP12.38□□□□□ -0.43
SCFD1-206ENST00000484733 GARTP22102 1010 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 SLC39A14Q15043 492 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 SV2CQ496J9 727 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 CCDC73Q6ZRK6 1079 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 GAREM2Q75VX8 874 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 EFCAB13Q8IY85 973 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 SPPL2BQ8TCT7 592 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 RSPRY1Q96DX4 576 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 MRPL44Q9H9J2 332 aaKnown RBP12.38□□□□□ -0.43
SCFD1-206ENST00000484733 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 SCN1AP35498 2009 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 CACNA1IQ9P0X4 2223 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 TDGF1P13385 188 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 PNPLA4P41247 253 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 ARHGAP15Q53QZ3 475 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 YAF2Q8IY57 180 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 ZNF560Q96MR9 790 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 CLIC6Q96NY7 704 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 ZSCAN16Q9H4T2 348 aaPredicted RBP12.38□□□□□ -0.43
SCFD1-206ENST00000484733 PIAS3Q9Y6X2 628 aa12.38□□□□□ -0.43
SCFD1-206ENST00000484733 SOBPA7XYQ1 873 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 KPNA7A9QM74 516 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
SCFD1-206ENST00000484733 MTAPQ13126 283 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 SLC39A12Q504Y0 691 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 ARID3BQ8IVW6 561 aaPredicted RBP12.37□□□□□ -0.43
SCFD1-206ENST00000484733 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 DCP1BQ8IZD4 617 aaKnown RBP12.37□□□□□ -0.43
SCFD1-206ENST00000484733 SPATA18Q8TC71 538 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 CSGALNACT1Q8TDX6 532 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 ATRIPQ8WXE1 791 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 PYM1Q9BRP8 204 aaKnown RBP12.37□□□□□ -0.43
SCFD1-206ENST00000484733 EPC1Q9H2F5 836 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 SLITRK6Q9H5Y7 841 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 TASP1Q9H6P5 420 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 TCHHQ07283 1943 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 FAM186AA6NE01 2351 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 CDC25CP30307 473 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 NRLP54845 237 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 VEPH1Q14D04 833 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 ARHGAP29Q52LW3 1261 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 WSCD1Q658N2 575 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 TTC9BQ8N6N2 239 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 CACTINQ8WUQ7 758 aaKnown RBP12.37□□□□□ -0.43
SCFD1-206ENST00000484733 IKZF4Q9H2S9 585 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 ATXN3LQ9H3M9 355 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 LMAN1LQ9HAT1 526 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 NDRG2Q9UN36 371 aaKnown RBP12.37□□□□□ -0.43
SCFD1-206ENST00000484733 MTMR6Q9Y217 621 aa12.37□□□□□ -0.43
SCFD1-206ENST00000484733 CHRNB1P11230 501 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 ATF6P18850 670 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 GABRR2P28476 465 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 NASPP49321 788 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-206ENST00000484733 PPP2R5DQ14738 602 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 GPR158Q5T848 1215 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 LRRTM3Q86VH5 581 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 GPR161Q8N6U8 529 aaKnown RBP12.36□□□□□ -0.43
SCFD1-206ENST00000484733 LEO1Q8WVC0 666 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-206ENST00000484733 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 MYBPHLA2RUH7 354 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 KIAA0391O15091 583 aaKnown RBP12.36□□□□□ -0.43
SCFD1-206ENST00000484733 SOAT2O75908 522 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 CCR3P51677 355 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 KCNA1Q09470 495 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 MGAT5BQ3V5L5 792 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 STXBP5Q5T5C0 1151 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 FAM173BQ6P4H8 233 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 LRRC52Q8N7C0 313 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 CXorf38Q8TB03 319 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 USP28Q96RU2 1077 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 SEPT5Q99719 369 aaPredicted RBP12.36□□□□□ -0.43
SCFD1-206ENST00000484733 LPIN3Q9BQK8 851 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 FAM213AQ9BRX8 229 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 PANK4Q9NVE7 773 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 PCDHB5Q9Y5E4 795 aa12.36□□□□□ -0.43
SCFD1-206ENST00000484733 KIF26AQ9ULI4 1882 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms