RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 METTL14Q9HCE5 456 aaKnown RBP17.82■□□□□ 0.44
HMGN1-214ENST00000482733 L1RE1Q9UN81 338 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 CTNND2Q9UQB3 1225 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 VWA8A3KMH1 1905 aa17.82■□□□□ 0.44
HMGN1-214ENST00000482733 RFPL2O75678 378 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 FGFR1OPO95684 399 aaKnown RBP17.81■□□□□ 0.44
HMGN1-214ENST00000482733 MYL7Q01449 175 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 SMARCB1Q12824 385 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 C1orf220Q5T0J3 134 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 SCARA3Q6AZY7 606 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 SV2AQ7L0J3 742 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 FILIP1Q7Z7B0 1213 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 ADHFE1Q8IWW8 467 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 TCEAL8Q8IYN2 117 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 SLC7A14Q8TBB6 771 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 TAF4BQ92750 862 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 EEF2KMTQ96G04 330 aa17.81■□□□□ 0.44
HMGN1-214ENST00000482733 PHF7Q9BWX1 381 aaPredicted RBP17.81■□□□□ 0.44
HMGN1-214ENST00000482733 PRRG1O14668 218 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 XYLBO75191 536 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 MYL6P60660 151 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 TNNC1P63316 161 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 TSPY1Q01534 308 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 SOWAHAQ2M3V2 549 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 SGSM1Q2NKQ1 1148 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 ZNF699Q32M78 642 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 WDR72Q3MJ13 1102 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 LIMS2Q7Z4I7 341 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 FRMD5Q7Z6J6 570 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 DCP1BQ8IZD4 617 aaKnown RBP17.8■□□□□ 0.44
HMGN1-214ENST00000482733 ADGRF2Q8IZF7 708 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 SMG7Q92540 1137 aaKnown RBP17.8■□□□□ 0.44
HMGN1-214ENST00000482733 ZNF707Q96C28 371 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-214ENST00000482733 MMS19Q96T76 1030 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 DUSP9Q99956 384 aaKnown RBP17.8■□□□□ 0.44
HMGN1-214ENST00000482733 ACBD6Q9BR61 282 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 ZCWPW1Q9H0M4 648 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 XYLT2Q9H1B5 865 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 PIDD1Q9HB75 910 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 CYP4F11Q9HBI6 524 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 TMEM8AQ9HCN3 771 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 ARMCX3Q9UH62 379 aaPredicted RBP17.8■□□□□ 0.44
HMGN1-214ENST00000482733 DACH1Q9UI36 760 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 RWDD2AQ9UIY3 292 aa17.8■□□□□ 0.44
HMGN1-214ENST00000482733 GABRDO14764 452 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 TACC1O75410 805 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 GNA14O95837 355 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 TRIM49P0CI25 452 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 TRIM49CP0CI26 452 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 P4HA1P13674 534 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 PCSK1P29120 753 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 GCLMP48507 274 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 ZP2Q05996 745 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 ADCY1Q08828 1119 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 ZNF667Q5HYK9 610 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 KRT39Q6A163 491 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 RNF19BQ6ZMZ0 732 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 OR10T2Q8NGX3 314 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 C2orf15Q8WU43 125 aaKnown RBP17.79■□□□□ 0.44
HMGN1-214ENST00000482733 RTP3Q9BQQ7 232 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 IMPG2Q9BZV3 1241 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 DDX43Q9NXZ2 648 aaKnown RBP17.79■□□□□ 0.44
HMGN1-214ENST00000482733 HSFX1Q9UBD0 423 aa17.79■□□□□ 0.44
HMGN1-214ENST00000482733 CLSTN1O94985 981 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 VNN1O95497 513 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 LRG1P02750 347 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 WEE2P0C1S8 567 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 OR4Q2P0C623 313 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 WARSP23381 471 aaKnown RBP17.78■□□□□ 0.44
HMGN1-214ENST00000482733 PIK3CAP42336 1068 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 STX17P56962 302 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 NLRP12P59046 1061 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 PPP3CAQ08209 521 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 PLD1Q13393 1074 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 NFE2Q16621 373 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-214ENST00000482733 CCDC40Q4G0X9 1142 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 CT47A1Q5JQC4 288 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-214ENST00000482733 CCDC150Q8NCX0 1101 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 COL25A1Q9BXS0 654 aaPredicted RBP17.78■□□□□ 0.44
HMGN1-214ENST00000482733 POMKQ9H5K3 350 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 WDR6Q9NNW5 1121 aaKnown RBP17.78■□□□□ 0.44
HMGN1-214ENST00000482733 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
HMGN1-214ENST00000482733 NR2E1Q9Y466 385 aa17.78■□□□□ 0.44
HMGN1-214ENST00000482733 MTMR11A4FU01 709 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 C19orf67A6NJJ6 358 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 SEC24AO95486 1093 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 HLA-DRAP01903 254 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 MXI1P50539 228 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 SLC39A12Q504Y0 691 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 DCAF17Q5H9S7 520 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-214ENST00000482733 TCERG1LQ5VWI1 586 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 RBM43Q6ZSC3 357 aaKnown RBP17.77■□□□□ 0.44
HMGN1-214ENST00000482733 GJD3Q8N144 294 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 KBTBD7Q8WVZ9 684 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 PGLYRP2Q96PD5 576 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 TMEM209Q96SK2 561 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 SNX25Q9H3E2 840 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 MMRN2Q9H8L6 949 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 USTQ9Y2C2 406 aa17.77■□□□□ 0.44
HMGN1-214ENST00000482733 INSL5Q9Y5Q6 135 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms