RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	TSGA10	Q9BZW7	698 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	ISCU	Q9H1K1	167 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	DNAI1	Q9UI46	699 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	LRFN2	Q9ULH4	789 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	NME7	Q9Y5B8	376 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	CYB561D2	O14569	222 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	KIF5C	O60282	957 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	HUS1	O60921	280 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	PAEP	P09466	180 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	GZMA	P12544	262 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	UNG	P13051	313 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-223	ENST00000479656	RAG1	P15918	1043 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	ABCB4	P21439	1286 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	GATM	P50440	423 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	IKBKE	Q14164	716 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	CLEC16A	Q2KHT3	1053 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	SMYD5	Q6GMV2	418 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	ACAD10	Q6JQN1	1059 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
APTX-223	ENST00000479656	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-223	ENST00000479656	PASD1	Q8IV76	773 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	TXLNB	Q8N3L3	684 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	TTC39C	Q8N584	583 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	APPL2	Q8NEU8	664 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	URGCP	Q8TCY9	931 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	CPA5	Q8WXQ8	436 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	DDX27	Q96GQ7	796 aa	Known RBP	11.95	□□□□□ -0.5
APTX-223	ENST00000479656	HEXIM2	Q96MH2	286 aa	Known RBP	11.95	□□□□□ -0.5
APTX-223	ENST00000479656	NT5C1A	Q9BXI3	368 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	KANSL3	Q9P2N6	904 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	L1RE1	Q9UN81	338 aa		11.95	□□□□□ -0.5
APTX-223	ENST00000479656	KIAA0100	Q14667	2235 aa	Known RBP	11.94	□□□□□ -0.5
APTX-223	ENST00000479656	KIF2A	O00139	706 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-223	ENST00000479656	KIAA0355	O15063	1070 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	HCRT	O43612	131 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	BUB1	O43683	1085 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	B4GALT3	O60512	393 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	B3GAT3	O94766	335 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	CYP1A1	P04798	512 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-223	ENST00000479656	PDGFRB	P09619	1106 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	CSF2RA	P15509	400 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	LMO2	P25791	158 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	PAN2	Q504Q3	1202 aa	Known RBP	11.94	□□□□□ -0.5
APTX-223	ENST00000479656	CNKSR3	Q6P9H4	555 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	DSTYK	Q6XUX3	929 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	LIMS2	Q7Z4I7	341 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	UBE2Q1	Q7Z7E8	422 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	ABI1	Q8IZP0	508 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	CRIPAK	Q8N1N5	446 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	KBTBD7	Q8WVZ9	684 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	SENP8	Q96LD8	212 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	CASD1	Q96PB1	797 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	WDR24	Q96S15	920 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	THAP2	Q9H0W7	228 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-223	ENST00000479656	TBC1D13	Q9NVG8	400 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	INTU	Q9ULD6	942 aa		11.94	□□□□□ -0.5
APTX-223	ENST00000479656	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	11.94	□□□□□ -0.5
APTX-223	ENST00000479656	TANC1	Q9C0D5	1861 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	ANKRD62	A6NC57	917 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656		A8MXQ7	604 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	FANCG	O15287	622 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	TACC1	O75410	805 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	MOCS3	O95396	460 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	TUBB4A	P04350	444 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	VDR	P11473	427 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	RFC2	P35250	354 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	GNL1	P36915	607 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-223	ENST00000479656	NAP1L1	P55209	391 aa	Known RBP	11.93	□□□□□ -0.5
APTX-223	ENST00000479656	RNASEL	Q05823	741 aa	Known RBP	11.93	□□□□□ -0.5
APTX-223	ENST00000479656	TIGD5	Q53EQ6	642 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	NAA35	Q5VZE5	725 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	CD300LG	Q6UXG3	332 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	DPH6	Q7L8W6	267 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	ACOT1	Q86TX2	421 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	SLC35F6	Q8N357	371 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	PDCL2	Q8N4E4	241 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	TOP6BL	Q8N6T0	577 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	C12orf29	Q8N999	325 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	HASPIN	Q8TF76	798 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	UBE2Q2	Q8WVN8	375 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	SECISBP2L	Q93073	1101 aa	Known RBP	11.93	□□□□□ -0.5
APTX-223	ENST00000479656	UROC1	Q96N76	676 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	SNX25	Q9H3E2	840 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-223	ENST00000479656		F8W810	466 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656		I3L4J1	428 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	UPP2	O95045	317 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	TMEM253	P0C7T8	217 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	BRCC3	P46736	316 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	WSCD1	Q658N2	575 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	MFSD5	Q6N075	450 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	DCLRE1A	Q6PJP8	1040 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	TRIM72	Q6ZMU5	477 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	UNC93A	Q86WB7	457 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	OSTM1	Q86WC4	334 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	COLGALT2	Q8IYK4	626 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	ADGRF2	Q8IZF7	708 aa		11.93	□□□□□ -0.5
APTX-223	ENST00000479656	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.93	□□□□□ -0.5
APTX-223	ENST00000479656	ARHGEF26	Q96DR7	871 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms