RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 COL28A1Q2UY09 1125 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 TXNDC11Q6PKC3 985 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 RALGPS2Q86X27 583 aaPredicted RBP15.78■□□□□ 0.12
USP11-207ENST00000478596 SYT2Q8N9I0 419 aaPredicted RBP15.78■□□□□ 0.12
USP11-207ENST00000478596 TCP11Q8WWU5 503 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 PRPF31Q8WWY3 499 aaKnown RBP15.78■□□□□ 0.12
USP11-207ENST00000478596 DRC1Q96MC2 740 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 ZSWIM3Q96MP5 696 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 POLR3FQ9H1D9 316 aaPredicted RBP15.78■□□□□ 0.12
USP11-207ENST00000478596 DUSP15Q9H1R2 295 aaPredicted RBP15.78■□□□□ 0.12
USP11-207ENST00000478596 KCND2Q9NZV8 630 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 MTRRQ9UBK8 725 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 TICRRQ7Z2Z1 1910 aa15.78■□□□□ 0.12
USP11-207ENST00000478596 NPHP3-ACAD11A0A0J9YXS1 232 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 EIF4E1BA6NMX2 242 aaKnown RBP15.77■□□□□ 0.12
USP11-207ENST00000478596 SLC38A8A6NNN8 435 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 SPECC1L-ADORA2AF8WAN1 911 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 CDX4O14627 284 aaPredicted RBP15.77■□□□□ 0.12
USP11-207ENST00000478596 HIP1RO75146 1068 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 CTHP32929 405 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 VIPR2P41587 438 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 PXNP49023 591 aaPredicted RBP15.77■□□□□ 0.12
USP11-207ENST00000478596 KPNA1P52294 538 aaPredicted RBP15.77■□□□□ 0.12
USP11-207ENST00000478596 LAMTOR4Q0VGL1 99 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 TUSC3Q13454 348 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 POSTNQ15063 836 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 RINT1Q6NUQ1 792 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.77■□□□□ 0.12
USP11-207ENST00000478596 GLIS3Q8NEA6 775 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 GPT2Q8TD30 523 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 HASPINQ8TF76 798 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 PSPC1Q8WXF1 523 aaKnown RBP15.77■□□□□ 0.12
USP11-207ENST00000478596 DDX12PQ92771 950 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 E2F7Q96AV8 911 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 CORO1BQ9BR76 489 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 TIPINQ9BVW5 301 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 BLZF1Q9H2G9 400 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 NXF3Q9H4D5 531 aaKnown RBP15.77■□□□□ 0.12
USP11-207ENST00000478596 EXOC1Q9NV70 894 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 CACNG4Q9UBN1 327 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 SPAG17Q6Q759 2223 aa15.77■□□□□ 0.12
USP11-207ENST00000478596 NCANO14594 1321 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CHADO15335 359 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 RHOBTB1O94844 696 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 SMC2O95347 1197 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 LRG1P02750 347 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CYP11B2P19099 503 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 AKAP5P24588 427 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CCR2P41597 374 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 SOX9P48436 509 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CREB5Q02930 508 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 NCBP1Q09161 790 aaKnown RBP15.76■□□□□ 0.11
USP11-207ENST00000478596 ELF2Q15723 593 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CAMK4Q16566 473 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 SKOR2Q2VWA4 1001 aaPredicted RBP15.76■□□□□ 0.11
USP11-207ENST00000478596 CAVIN1Q6NZI2 390 aaKnown RBP15.76■□□□□ 0.11
USP11-207ENST00000478596 CCDC65Q8IXS2 484 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 DEFB124Q8NES8 71 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 ENGASEQ8NFI3 743 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 TMEM143Q96AN5 459 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 IFT74Q96LB3 600 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 TIGD1Q96MW7 591 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 REEP2Q9BRK0 252 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CLSTN2Q9H4D0 955 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 BACE2Q9Y5Z0 518 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CDY1Q9Y6F8 540 aa15.76■□□□□ 0.11
USP11-207ENST00000478596 CELSR3Q9NYQ7 3312 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 MYMKA6NI61 221 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 HEPACAM2A8MVW5 462 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 ASAP2O43150 1006 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 FGFR3P22607 806 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 GUCY2CP25092 1073 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 FCHO2Q0JRZ9 810 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 DMP1Q13316 513 aaPredicted RBP15.75■□□□□ 0.11
USP11-207ENST00000478596 PNOCQ13519 176 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 CCDC183Q5T5S1 534 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 PDZD4Q76G19 769 aaPredicted RBP15.75■□□□□ 0.11
USP11-207ENST00000478596 CAMKK1Q8N5S9 505 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 RNF149Q8NC42 400 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 ZSCAN18Q8TBC5 510 aaPredicted RBP15.75■□□□□ 0.11
USP11-207ENST00000478596 FAM200AQ8TCP9 573 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 KIFAP3Q92845 792 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 SMARCE1Q969G3 411 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 TRIM9Q9C026 710 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 TRIM6Q9C030 488 aaPredicted RBP15.75■□□□□ 0.11
USP11-207ENST00000478596 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
USP11-207ENST00000478596 GPRC5CQ9NQ84 441 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 KBTBD4Q9NVX7 518 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 ODF2LQ9ULJ1 636 aa15.75■□□□□ 0.11
USP11-207ENST00000478596 TDRD15B5MCY1 1934 aaKnown RBP15.74■□□□□ 0.11
USP11-207ENST00000478596 CASTOR2A6NHX0 329 aa15.74■□□□□ 0.11
USP11-207ENST00000478596 LRRIQ4A6NIV6 560 aa15.74■□□□□ 0.11
USP11-207ENST00000478596 H0Y626 953 aa15.74■□□□□ 0.11
USP11-207ENST00000478596 KHNYNO15037 678 aaKnown RBP15.74■□□□□ 0.11
USP11-207ENST00000478596 TRIM16O95361 564 aa15.74■□□□□ 0.11
USP11-207ENST00000478596 MYL1P05976 194 aa15.74■□□□□ 0.11
USP11-207ENST00000478596 CASP1P29466 404 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms