RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SHEQ5VZ18 495 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 KLHDC10Q6PID8 442 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ZNF704Q6ZNC4 412 aaPredicted RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 RBM44Q6ZP01 1051 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 IDO2Q6ZQW0 420 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 PRR23CQ6ZRP0 262 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ACAD11Q709F0 780 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 GPR141Q7Z602 305 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 FAM83AQ86UY5 434 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SATL1Q86VE3 508 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 GATAD2AQ86YP4 633 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SPATA2LQ8IUW3 424 aaPredicted RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 LRRC34Q8IZ02 419 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SCYL3Q8IZE3 742 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 CELF2-AS1Q8N7Q2 184 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 TTLQ8NG68 377 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SGF29Q96ES7 293 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 OLFM1Q99784 485 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 RNF38Q9H0F5 515 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 CDH19Q9H159 772 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 HAUS4Q9H6D7 363 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 PHAXQ9H814 394 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 MOV10Q9HCE1 1003 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 INTS13Q9NVM9 706 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 TMEM260Q9NX78 707 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SIRPGQ9P1W8 387 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ZNF69Q9UC07 566 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 CNOT8Q9UFF9 292 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 PCDHGC3Q9UN70 934 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SLC8A2Q9UPR5 921 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 TMEM5Q9Y2B1 443 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 UTP11Q9Y3A2 253 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 RRP7AQ9Y3A4 280 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 RTCBQ9Y3I0 505 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 SNX14Q9Y5W7 946 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ADGRB2O60241 1585 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 KNDC1Q76NI1 1749 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ABCC5O15440 1437 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 RIMS2Q9UQ26 1411 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ABCC6O95255 1503 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 A8MX80 341 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 H3BUI4 141 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 H7C0C1 242 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 CASQ2O14958 399 aaPredicted RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 NCAM2O15394 837 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ADCY6O43306 1168 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SNX3O60493 162 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 TLR2O60603 784 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 TRMUO75648 421 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 ALX3O95076 343 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 GJB6O95452 261 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 EGFRP00533 1210 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 AFPP02771 609 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 FUCA1P04066 466 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 GSTM1P09488 218 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ALOX5P09917 674 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 RARBP10826 455 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 P4HA1P13674 534 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 CD46P15529 392 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ZNF3P17036 446 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 GM2AP17900 193 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ALAS2P22557 587 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SLC26A3P40879 764 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 RPL5P46777 297 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 GNG2P59768 71 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ADAM17P78536 824 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 PTSQ03393 145 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 UBXN1Q04323 297 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 C19orf57Q0VDD7 668 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 STK4Q13043 487 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 PTK2BQ14289 1009 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 NPTX1Q15818 432 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 GRIK5Q16478 980 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 TXNRD1Q16881 649 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 RGS21Q2M5E4 152 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 FBXO43Q4G163 708 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 TIGD2Q4W5G0 525 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 VWA3BQ502W6 1294 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 FAM26DQ5JW98 314 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ZNF658Q5TYW1 1059 aaPredicted RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 C8orf74Q6P047 294 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 BORAQ6PGQ7 559 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 OLFM4Q6UX06 510 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 KRT26Q7Z3Y9 468 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 CNGA4Q8IV77 575 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 NELFCDQ8IXH7 590 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 ADSSL1Q8N142 457 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SHCBP1Q8NEM2 672 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 OR10Z1Q8NGY1 313 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 RIN3Q8TB24 985 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 OTUD7AQ8TE49 926 aaPredicted RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 SLC7A3Q8WY07 619 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 FAM149B1Q96BN6 582 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 SGK3Q96BR1 496 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 NUDT16Q96DE0 195 aaKnown RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 ZNF274Q96GC6 653 aaPredicted RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 NLRP4Q96MN2 994 aa4.36□□□□□ -1.71
CD55-208ENST00000476590 PRICKLE1Q96MT3 831 aaPredicted RBP4.36□□□□□ -1.71
CD55-208ENST00000476590 TSNARE1Q96NA8 513 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms