RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 MTO1Q9Y2Z2 717 aaKnown RBP6.15□□□□□ -1.42
PTCD3-211ENST00000476215 FPGT-TNNI3KV9GXZ4 949 aa6.15□□□□□ -1.42
PTCD3-211ENST00000476215 CCDC194A0A1B0GVG4 234 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 MYO1FO00160 1098 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 UNC5CO95185 931 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 KIF20AO95235 890 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 MAP4K4O95819 1239 aaPredicted RBP6.14□□□□□ -1.43
PTCD3-211ENST00000476215 BRAFP15056 766 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 PIGFQ07326 219 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 ZNF783Q6ZMS7 281 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 LRRC55Q6ZSA7 311 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 CFAP52Q8N1V2 620 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 OR6B3Q8NGW1 331 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 KBTBD7Q8WVZ9 684 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 APIPQ96GX9 242 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 SMOQ99835 787 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 CNPPD1Q9BV87 410 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 TRIM54Q9BYV2 358 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 NUP62CLQ9H1M0 184 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 IKZF4Q9H2S9 585 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 NRDE2Q9H7Z3 1164 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 KIAA1586Q9HCI6 787 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 AKIP1Q9NQ31 210 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 RNF181Q9P0P0 153 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 DKK2Q9UBU2 259 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 OGDHLQ9ULD0 1010 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 MAP3K2Q9Y2U5 619 aa6.14□□□□□ -1.43
PTCD3-211ENST00000476215 GAGE12BA1L429 117 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 GAGE12HA6NDE8 117 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 POLRMTO00411 1230 aaKnown RBP6.13□□□□□ -1.43
PTCD3-211ENST00000476215 TBX3O15119 743 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 PMM2O15305 246 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 VPS4BO75351 444 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 DNAJB5O75953 348 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 NDUFA10O95299 355 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 CFIP05156 583 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 HLA-DOAP06340 250 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 ELANEP08246 267 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 PHKG2P15735 406 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 EN2P19622 333 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-211ENST00000476215 SUMO3P55854 103 aaPredicted RBP6.13□□□□□ -1.43
PTCD3-211ENST00000476215 TAPT1Q6NXT6 567 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 MRGPRGQ86SM5 289 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 FAM46DQ8NEK8 389 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 SUCLG2Q96I99 432 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 MED15Q96RN5 788 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 TRIB1Q96RU8 372 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 ZNF287Q9HBT7 754 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 MRPS18AQ9NVS2 196 aaKnown RBP6.13□□□□□ -1.43
PTCD3-211ENST00000476215 CPNE7Q9UBL6 633 aa6.13□□□□□ -1.43
PTCD3-211ENST00000476215 REXO2Q9Y3B8 237 aaKnown RBP6.13□□□□□ -1.43
PTCD3-211ENST00000476215 CCDC195A0A1B0GUA6 201 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 ISM1B1AKI9 464 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 BTN3A1O00481 513 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 FOXN1O15353 648 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 TBC1D4O60343 1298 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 ABHD16AO95870 558 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 GRPP07492 148 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 PIM1P11309 404 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-211ENST00000476215 ARFIP2P53365 341 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 MXRA7P84157 204 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 PICALMQ13492 652 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 CNGA2Q16280 664 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 SPDYE7PQ495Y7 208 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 IL31Q6EBC2 164 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 SLC30A10Q6XR72 485 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 TMEM132CQ8N3T6 1108 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 RNF31Q96EP0 1072 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 MYEOVQ96EZ4 313 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 SACM1LQ9NTJ5 587 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 VSX1Q9NZR4 365 aaPredicted RBP6.12□□□□□ -1.43
PTCD3-211ENST00000476215 KCNE5Q9UJ90 142 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 PLEKHM1Q9Y4G2 1056 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 NOX1Q9Y5S8 564 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 SNX13Q9Y5W8 968 aa6.12□□□□□ -1.43
PTCD3-211ENST00000476215 A0A087X1B8 175 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 ANO9A1A5B4 782 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 TMEM200CA6NKL6 621 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 MYO1CO00159 1063 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 THP07101 528 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 MYL3P08590 195 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 ZKSCAN1P17029 563 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-211ENST00000476215 LAG3P18627 525 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 CXADRP78310 365 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 POU6F2P78424 691 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-211ENST00000476215 FMO1Q01740 532 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 COL10A1Q03692 680 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 RESTQ13127 1097 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 SLC13A2Q13183 592 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 BEAN1Q3B7T3 259 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 AMOTQ4VCS5 1084 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 FAM160B1Q5W0V3 765 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 B3GNTL1Q67FW5 361 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-211ENST00000476215 LMBRD2Q68DH5 695 aaPredicted RBP6.11□□□□□ -1.43
PTCD3-211ENST00000476215 KRT78Q8N1N4 520 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 CPEB3Q8NE35 698 aaKnown RBP6.11□□□□□ -1.43
PTCD3-211ENST00000476215 STK32BQ9NY57 414 aa6.11□□□□□ -1.43
PTCD3-211ENST00000476215 TMEM191CA6NGB0 347 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 MARCH11A6NNE9 402 aa6.1□□□□□ -1.43
PTCD3-211ENST00000476215 RHPN2P1A8MT19 583 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms