RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TRIP12Q14669 1992 aaPredicted RBP13.05□□□□□ -0.32
MRPL55-227ENST00000475832 KPNA7A9QM74 516 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 C9IYK1 514 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 PIRO00625 290 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 ZNF263O14978 683 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 RTN2O75298 545 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 FAM163BP0C2L3 166 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 CD19P15391 556 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 CSF2RAP15509 400 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 SCNN1GP51170 649 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 SMAD3P84022 425 aaKnown RBP13.04□□□□□ -0.32
MRPL55-227ENST00000475832 PPIGQ13427 754 aaKnown RBP eCLIP13.04□□□□□ -0.321e-6■■■■□ 24.6
MRPL55-227ENST00000475832 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 ZNF569Q5MCW4 686 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 AGMOQ6ZNB7 445 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 DPH6Q7L8W6 267 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 UBR7Q8N806 425 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 SLC30A5Q8TAD4 765 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 CXorf38Q8TB03 319 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 LNX1Q8TBB1 728 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-227ENST00000475832 ADAMTS19Q8TE59 1207 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
MRPL55-227ENST00000475832 LPPQ93052 612 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 ZFP42Q96MM3 310 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 NOX5Q96PH1 765 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 PPP1R12CQ9BZL4 782 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 SNX25Q9H3E2 840 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 TMEM161AQ9NX61 479 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 DNAI1Q9UI46 699 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 BARX2Q9UMQ3 279 aaPredicted RBP13.04□□□□□ -0.32
MRPL55-227ENST00000475832 INPP5FQ9Y2H2 1132 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 PCDHB7Q9Y5E2 793 aa13.04□□□□□ -0.32
MRPL55-227ENST00000475832 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 BTNL10A8MVZ5 291 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 TMCO5BA8MYB1 307 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 PTGESO14684 152 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 NBNO60934 754 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 MMEP08473 750 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 NSFP46459 744 aaKnown RBP13.03□□□□□ -0.32
MRPL55-227ENST00000475832 ZNF132P52740 706 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 FAM189BP81408 668 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 SHHQ15465 462 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 STILQ15468 1287 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 RASIP1Q5U651 963 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 UNC93AQ86WB7 457 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 MSANTD4Q8NCY6 345 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 APPL2Q8NEU8 664 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 DBF4BQ8NFT6 615 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 SLC20A1Q8WUM9 679 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
MRPL55-227ENST00000475832 SYT11Q9BT88 431 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 SMYD3Q9H7B4 428 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 IL23AQ9NPF7 189 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 GDAP2Q9NXN4 497 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 NCOR1O75376 2440 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 CDH23Q9H251 3354 aa13.03□□□□□ -0.32
MRPL55-227ENST00000475832 A0A0A6YYK5 440 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-227ENST00000475832 MACROD2A1Z1Q3 448 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 CTAGE9A4FU28 777 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 PODXLO00592 558 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 INPPL1O15357 1258 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 CILPO75339 1184 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 KIF4AO95239 1232 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 LSM8O95777 96 aaKnown RBP13.02□□□□□ -0.33
MRPL55-227ENST00000475832 CXCL10P02778 98 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 FTLP02792 175 aaPredicted RBP13.02□□□□□ -0.33
MRPL55-227ENST00000475832 MYBL1P10243 752 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 VDRP11473 427 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
MRPL55-227ENST00000475832 RAP1GAPP47736 663 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 CCL23P55773 120 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 FMO1Q01740 532 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
MRPL55-227ENST00000475832 INCA1Q0VD86 236 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 TUSC3Q13454 348 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 IKBKEQ14164 716 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 CLEC16AQ2KHT3 1053 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 ZNF394Q53GI3 561 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 NOMO2Q5JPE7 1267 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 TMEM240Q5SV17 173 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 LIN9Q5TKA1 542 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 ACAD10Q6JQN1 1059 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 DSTYKQ6XUX3 929 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
MRPL55-227ENST00000475832 RHOT2Q8IXI1 618 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 TOP6BLQ8N6T0 577 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 TMEM35BQ8NCS4 154 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 OR6B3Q8NGW1 331 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 ZNF606Q8WXB4 792 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 TMEM176AQ96HP8 235 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 HEXIM2Q96MH2 286 aaKnown RBP13.02□□□□□ -0.33
MRPL55-227ENST00000475832 ASB2Q96Q27 587 aa13.02□□□□□ -0.33
MRPL55-227ENST00000475832 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.02□□□□□ -0.332e-7■■■□□ 15.6
MRPL55-227ENST00000475832 OSBPL7Q9BZF2 842 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms