RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CAVIN1Q6NZI2 390 aaKnown RBP18.18■□□□□ 0.5
SCAF11-206ENST00000474828 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.18■□□□□ 0.5
SCAF11-206ENST00000474828 TAS1R2Q8TE23 839 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 SUSD6Q92537 303 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 PKMYT1Q99640 499 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 ACBD6Q9BR61 282 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 ZCWPW1Q9H0M4 648 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 HSFX1Q9UBD0 423 aa18.18■□□□□ 0.5
SCAF11-206ENST00000474828 BARX2Q9UMQ3 279 aaPredicted RBP18.18■□□□□ 0.5
SCAF11-206ENST00000474828 P4HA2O15460 535 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 LETM1O95202 739 aaPredicted RBP18.17■□□□□ 0.5
SCAF11-206ENST00000474828 VNN2O95498 520 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 KCNA5P22460 613 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 LHX1P48742 406 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 MXI1P50539 228 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 BIRC3Q13489 604 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 SKIV2LQ15477 1246 aaKnown RBP18.17■□□□□ 0.5
SCAF11-206ENST00000474828 STX1AQ16623 288 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 AAK1Q2M2I8 961 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 WDR72Q3MJ13 1102 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 CBWD6Q4V339 395 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 CBWD3Q5JTY5 395 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 CBWD5Q5RIA9 395 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 SASS6Q6UVJ0 657 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 METTL23Q86XA0 190 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 TCEAL8Q8IYN2 117 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 KREMEN2Q8NCW0 462 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 FBXL13Q8NEE6 735 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 OR10T2Q8NGX3 314 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 BCO2Q9BYV7 579 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 FAM124BQ9H5Z6 455 aaPredicted RBP18.17■□□□□ 0.5
SCAF11-206ENST00000474828 ZDHHC7Q9NXF8 308 aa18.17■□□□□ 0.5
SCAF11-206ENST00000474828 AFF4Q9UHB7 1163 aaKnown RBP18.17■□□□□ 0.5
SCAF11-206ENST00000474828 R3HCC1Q9Y3T6 440 aaKnown RBP18.17■□□□□ 0.5
SCAF11-206ENST00000474828 PHACTR2O75167 634 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 CCDC192P0DO97 292 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 PRKCSHP14314 528 aaPredicted RBP18.16■□□□□ 0.5
SCAF11-206ENST00000474828 TFF2Q03403 129 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 ITIH3Q06033 890 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 SMARCB1Q12824 385 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 SMAD4Q13485 552 aaKnown RBP18.16■□□□□ 0.5
SCAF11-206ENST00000474828 OSTM1Q86WC4 334 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 PALB2Q86YC2 1186 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 SEMA4DQ92854 862 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 ADAM7Q9H2U9 754 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 SFXN1Q9H9B4 322 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 MAN1C1Q9NR34 630 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 RAB20Q9NX57 234 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 CD207Q9UJ71 328 aa18.16■□□□□ 0.5
SCAF11-206ENST00000474828 MTCL1Q9Y4B5 1905 aaKnown RBP18.15■□□□□ 0.5
SCAF11-206ENST00000474828 GRXCR2A6NFK2 248 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ZMYND10O75800 440 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 CA8P35219 290 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ASPAP45381 313 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 FMO5P49326 533 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 MRPS5P82675 430 aaKnown RBP18.15■□□□□ 0.5
SCAF11-206ENST00000474828 TYRO3Q06418 890 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ZNF699Q32M78 642 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 CCDC40Q4G0X9 1142 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ZNF667Q5HYK9 610 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 TJAP1Q5JTD0 557 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 CDKAL1Q5VV42 579 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 LLGL2Q6P1M3 1020 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ELMSAN1Q6PJG2 1045 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 C11orf57Q6ZUT1 292 aaPredicted RBP18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ADGRF2Q8IZF7 708 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 THEM5Q8N1Q8 247 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 LMO3Q8TAP4 145 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ZNF707Q96C28 371 aaPredicted RBP18.15■□□□□ 0.5
SCAF11-206ENST00000474828 CNOT6LQ96LI5 555 aaKnown RBP18.15■□□□□ 0.5
SCAF11-206ENST00000474828 ASB2Q96Q27 587 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 BPIFA3Q9BQP9 254 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 APOBEC3GQ9HC16 384 aaKnown RBP18.15■□□□□ 0.5
SCAF11-206ENST00000474828 NME7Q9Y5B8 376 aa18.15■□□□□ 0.5
SCAF11-206ENST00000474828 VCANP13611 3396 aa18.14■□□□□ 0.5
SCAF11-206ENST00000474828 H3BQ06 376 aaPredicted RBP18.14■□□□□ 0.49
SCAF11-206ENST00000474828 MBTPS2O43462 519 aa18.14■□□□□ 0.49
SCAF11-206ENST00000474828 N4BP1O75113 896 aaKnown RBP18.14■□□□□ 0.49
SCAF11-206ENST00000474828 HNRNPA1P09651 372 aaKnown RBP eCLIP18.14■□□□□ 0.49
SCAF11-206ENST00000474828 BMP1P13497 986 aa18.14■□□□□ 0.49
SCAF11-206ENST00000474828 PIK3CAP42336 1068 aa18.14■□□□□ 0.49
SCAF11-206ENST00000474828 SMAD2Q15796 467 aaKnown RBP18.14■□□□□ 0.49
SCAF11-206ENST00000474828 SMYD5Q6GMV2 418 aa18.14■□□□□ 0.49
SCAF11-206ENST00000474828 FAM171BQ6P995 826 aa18.14■□□□□ 0.49
SCAF11-206ENST00000474828 GPR149Q86SP6 731 aa18.14■□□□□ 0.49
SCAF11-206ENST00000474828 LRRTM3Q86VH5 581 aa18.14■□□□□ 0.49
SCAF11-206ENST00000474828 C2orf15Q8WU43 125 aaKnown RBP18.14■□□□□ 0.49
SCAF11-206ENST00000474828 DDX43Q9NXZ2 648 aaKnown RBP18.14■□□□□ 0.49
SCAF11-206ENST00000474828 LRRN2O75325 713 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 PCSK1P29120 753 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 TNNC1P63316 161 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 NOP14P78316 857 aaKnown RBP18.13■□□□□ 0.49
SCAF11-206ENST00000474828 MYL7Q01449 175 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 INCA1Q0VD86 236 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 KCNH2Q12809 1159 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 NCAPHQ15003 741 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 DCAF17Q5H9S7 520 aaPredicted RBP18.13■□□□□ 0.49
SCAF11-206ENST00000474828 INTS6LQ5JSJ4 861 aaKnown RBP18.13■□□□□ 0.49
SCAF11-206ENST00000474828 TCERG1LQ5VWI1 586 aa18.13■□□□□ 0.49
SCAF11-206ENST00000474828 RNF19BQ6ZMZ0 732 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms