RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 ASAH2Q9NR71 780 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 HSPBP1Q9NZL4 362 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 PCDHA5Q9Y5H7 936 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 NUMBLQ9Y6R0 609 aa20.06■□□□□ 0.8
CCDC171-206ENST00000474193 SPTLC1O15269 473 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 MICAL2O94851 1124 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 ITGB3P05106 788 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 CFHP08603 1231 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 POLR2BP30876 1174 aaKnown RBP20.05■□□□□ 0.8
CCDC171-206ENST00000474193 TUFMP49411 452 aaKnown RBP20.05■□□□□ 0.8
CCDC171-206ENST00000474193 CLCN5P51795 746 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 MYO1EQ12965 1108 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 DUSP4Q13115 394 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 HTR4Q13639 388 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 DUOXA2Q1HG44 320 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 ASTLQ6HA08 431 aaPredicted RBP20.05■□□□□ 0.8
CCDC171-206ENST00000474193 NELFCDQ8IXH7 590 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 LRRC52Q8N7C0 313 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 GOLGA5Q8TBA6 731 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 ING5Q8WYH8 240 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 SYAP1Q96A49 352 aaPredicted RBP20.05■□□□□ 0.8
CCDC171-206ENST00000474193 MCRS1Q96EZ8 462 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 FNBP1Q96RU3 617 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 PDE11AQ9HCR9 933 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 HSFX1Q9UBD0 423 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 ASB3Q9Y575 518 aa20.05■□□□□ 0.8
CCDC171-206ENST00000474193 OR4Q2P0C623 313 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 PTPN5P54829 565 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 TSPY1Q01534 308 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 EHHADHQ08426 723 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 TAF12Q16514 161 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 EPM2AIP1Q7L775 607 aaPredicted RBP20.04■□□□□ 0.8
CCDC171-206ENST00000474193 ITIH5Q86UX2 942 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 SIX5Q8N196 739 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 XXYLT1Q8NBI6 393 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 C2orf15Q8WU43 125 aaKnown RBP20.04■□□□□ 0.8
CCDC171-206ENST00000474193 ERCC4Q92889 916 aaPredicted RBP20.04■□□□□ 0.8
CCDC171-206ENST00000474193 SHDQ96IW2 340 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 GPR88Q9GZN0 384 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 DOCK8Q8NF50 2099 aa20.04■□□□□ 0.8
CCDC171-206ENST00000474193 DOCK6Q96HP0 2047 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 ANK1P16157 1881 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 NARSO43776 548 aaKnown RBP20.03■□□□□ 0.8
CCDC171-206ENST00000474193 FGF19O95750 216 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 PDGFBP01127 241 aaPredicted RBP20.03■□□□□ 0.8
CCDC171-206ENST00000474193 MYL4P12829 197 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 TNNI1P19237 187 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 MYL7Q01449 175 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 PFKPQ01813 784 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 BFSP1Q12934 665 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 STK4Q13043 487 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 VEPH1Q14D04 833 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 KNOP1Q1ED39 458 aaKnown RBP20.03■□□□□ 0.8
CCDC171-206ENST00000474193 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
CCDC171-206ENST00000474193 SLC39A12Q504Y0 691 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 WSCD1Q658N2 575 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 CENPPQ6IPU0 288 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 PARM1Q6UWI2 310 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 NPAS3Q8IXF0 933 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 TMEM86AQ8N2M4 240 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 RDH13Q8NBN7 331 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 GLIS3Q8NEA6 775 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 ZSWIM2Q8NEG5 633 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 FAM200AQ8TCP9 573 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 FGF14Q92915 247 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 RTP3Q9BQQ7 232 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 AGPAT3Q9NRZ7 376 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 INTS13Q9NVM9 706 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 KIAA1468Q9P260 1216 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 YIPF1Q9Y548 306 aa20.03■□□□□ 0.8
CCDC171-206ENST00000474193 MTMR11A4FU01 709 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 CLIC2O15247 247 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 CYP2J2P51589 502 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 SNRNP35Q16560 246 aaKnown RBP20.02■□□□□ 0.8
CCDC171-206ENST00000474193 ZNF658Q5TYW1 1059 aaPredicted RBP20.02■□□□□ 0.8
CCDC171-206ENST00000474193 C1orf127Q8N9H9 656 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 ATAD1Q8NBU5 361 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 SPATA20Q8TB22 786 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 SPPL2BQ8TCT7 592 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 SCFD1Q8WVM8 642 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 ZCWPW1Q9H0M4 648 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 SLC2A4RGQ9NR83 387 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 CEP72Q9P209 647 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 SLC27A5Q9Y2P5 690 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 ZDBF2Q9HCK1 2354 aa20.02■□□□□ 0.8
CCDC171-206ENST00000474193 TRIOO75962 3097 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 EXOC3O60645 756 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 LHX1P48742 406 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 VCPP55072 806 aaKnown RBP20.01■□□□□ 0.79
CCDC171-206ENST00000474193 STIM1Q13586 685 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 NFE2Q16621 373 aaPredicted RBP20.01■□□□□ 0.79
CCDC171-206ENST00000474193 MGAT5BQ3V5L5 792 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 CCDC183Q5T5S1 534 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 CBWD2Q8IUF1 395 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 WDR49Q8IV35 697 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 SPATA18Q8TC71 538 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 GPR152Q8TDT2 470 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 SEPT5Q99719 369 aaPredicted RBP20.01■□□□□ 0.79
CCDC171-206ENST00000474193 MTMR12Q9C0I1 747 aa20.01■□□□□ 0.79
CCDC171-206ENST00000474193 SLITRK6Q9H5Y7 841 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms