RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PIK3CAP42336 1068 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 PAPOLAP51003 745 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 TCP10Q12799 353 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 GPS1Q13098 491 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 MPP2Q14168 576 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 PSMD6Q15008 389 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 NAIF1Q69YI7 327 aaPredicted RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 CIAPIN1Q6FI81 312 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 CLNKQ7Z7G1 428 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 SIAH1Q8IUQ4 282 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 KIAA0825Q8IV33 1275 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 PALM2Q8IXS6 379 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 KCNN1Q92952 543 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 CYTH2Q99418 400 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 MAF1Q9H063 256 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 MANSC1Q9H8J5 431 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 AGO4Q9HCK5 861 aaKnown RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 VCX3AQ9NNX9 186 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 FAM198AQ9UFP1 575 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 CTDP1Q9Y5B0 961 aaPredicted RBP6.45□□□□□ -1.38
HERC4-209ENST00000473533 UBIAD1Q9Y5Z9 338 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 MYPNQ86TC9 1320 aa6.45□□□□□ -1.38
HERC4-209ENST00000473533 DENND3A2RUS2 1198 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 DDTLA6NHG4 134 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 KLF11O14901 512 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TP73O15350 636 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TYROBPO43914 113 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 ARP10275 920 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 GCLCP48506 637 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 PTDSS1P48651 473 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 CDK16Q00536 496 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 MGAT5Q09328 741 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SF3A3Q12874 501 aaKnown RBP eCLIP6.44□□□□□ -1.38
HERC4-209ENST00000473533 MTMR1Q13613 665 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TAF1BQ53T94 588 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 TFDP3Q5H9I0 405 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 ZNF449Q6P9G9 518 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 ADGRD1Q6QNK2 874 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 C4orf22Q6V702 233 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 C4orf50Q6ZRC1 276 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SV2AQ7L0J3 742 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CBWD2Q8IUF1 395 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 ZBED8Q8IZ13 594 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CYP4X1Q8N118 509 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SUPT20HQ8NEM7 779 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TAS1R2Q8TE23 839 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 OLFM3Q96PB7 478 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TSSK1BQ9BXA7 367 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 ACSS3Q9H6R3 686 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 KCNH7Q9NS40 1196 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 GINM1Q9NU53 330 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 PPP1R1BQ9UD71 204 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 SSX2IPQ9Y2D8 614 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 HNRNPDLO14979 420 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 MAGEC1O60732 1142 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SPAG7O75391 227 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 DGAT1O75907 488 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 GDF11O95390 407 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 ICAM1P05362 532 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CREB1P16220 341 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 PECAM1P16284 738 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 GNA15P30679 374 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 PDIA2Q13087 525 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 SURF1Q15526 300 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TRMT5Q32P41 509 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 TKFCQ3LXA3 575 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 DNAJC24Q6P3W2 148 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 NLRX1Q86UT6 975 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 LDHDQ86WU2 507 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 THNSL1Q8IYQ7 743 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TMEM35BQ8NCS4 154 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 TMEM161BQ8NDZ6 487 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SEMA4DQ92854 862 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 KAT5Q92993 513 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CDHR1Q96JP9 859 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 GBP5Q96PP8 586 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SLITRK1Q96PX8 696 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CSRNP1Q96S65 589 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 POP1Q99575 1024 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 YIPF3Q9GZM5 350 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 KIF9Q9HAQ2 790 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CYLDQ9NQC7 956 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 PAPOLBQ9NRJ5 636 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 STX18Q9P2W9 335 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 CCPG1Q9ULG6 757 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CLUHO75153 1309 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 UMODL1Q5DID0 1318 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 A8MUI8 341 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SGK1O00141 431 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 DESP17661 470 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 PEX19P40855 299 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 LIG4P49917 911 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CLCN2P51788 898 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 CCNHP51946 323 aaPredicted RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 KCNQ4P56696 695 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 SNAP25P60880 206 aa6.44□□□□□ -1.38
HERC4-209ENST00000473533 RPL26P61254 145 aaKnown RBP6.44□□□□□ -1.38
HERC4-209ENST00000473533 AP2B1P63010 937 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms