RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 OSGEPQ9NPF4 335 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 CTTNBP2NLQ9P2B4 639 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 CNOT8Q9UFF9 292 aaKnown RBP9.99□□□□□ -0.81
VPS52-216ENST00000471309 HMGXB4Q9UGU5 601 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 PUF60Q9UHX1 559 aaKnown RBP9.99□□□□□ -0.81
VPS52-216ENST00000471309 KIAA1257Q9ULG3 409 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 CEP83Q9Y592 693 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 SNX9Q9Y5X1 595 aa9.99□□□□□ -0.81
VPS52-216ENST00000471309 TSC2P49815 1807 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 MEIS3P2A8K0S8 358 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 EFCAB8A8MWE9 144 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 KPNA7A9QM74 516 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 CES2O00748 559 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 DYNC1I1O14576 645 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 NCK2O43639 380 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 BUB1BO60566 1050 aaPredicted RBP9.98□□□□□ -0.81
VPS52-216ENST00000471309 TADA3O75528 432 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 FTCDO95954 541 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 THP07101 528 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 CFHP08603 1231 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 VDRP11473 427 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 CD19P15391 556 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 MMP8P22894 467 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 NDST1P52848 882 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 STILQ15468 1287 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 ZNF394Q53GI3 561 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 PEX26Q7Z412 305 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 CTU1Q7Z7A3 348 aaKnown RBP9.98□□□□□ -0.81
VPS52-216ENST00000471309 ZNF598Q86UK7 904 aaKnown RBP9.98□□□□□ -0.81
VPS52-216ENST00000471309 UNC93AQ86WB7 457 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 TOP6BLQ8N6T0 577 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 TMEM35BQ8NCS4 154 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 ZNF564Q8TBZ8 553 aaPredicted RBP9.98□□□□□ -0.81
VPS52-216ENST00000471309 LPPQ93052 612 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 RPGRIP1Q96KN7 1286 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 OSBPL9Q96SU4 736 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 MMS19Q96T76 1030 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 GAD1Q99259 594 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 NUP85Q9BW27 656 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 NT5C1AQ9BXI3 368 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 FTHL17Q9BXU8 183 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 DNAI2Q9GZS0 605 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 GOLGA2P5Q9HBQ8 144 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 ABCB6Q9NP58 842 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 RGS18Q9NS28 235 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.98□□□□□ -0.81
VPS52-216ENST00000471309 STXBP5LQ9Y2K9 1186 aa9.98□□□□□ -0.81
VPS52-216ENST00000471309 SCN1AP35498 2009 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 C9IYK1 514 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 O00370 1275 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 SPTLC1O15269 473 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 ATMINO43313 823 aaPredicted RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 KIF4AO95239 1232 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 CALB1P05937 261 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 FAM163BP0C2L3 166 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 RRM1P23921 792 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 RPL9P32969 192 aaKnown RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 PTP4A2Q12974 167 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 GRIK3Q13003 919 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 RPS6KA1Q15418 735 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 SOWAHAQ2M3V2 549 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 SGO2Q562F6 1265 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 LIN9Q5TKA1 542 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 C1orf53Q5VUE5 145 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 FBXO46Q6PJ61 603 aaPredicted RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 ANKRD33Q7Z3H0 272 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 ZNF572Q7Z3I7 529 aaPredicted RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 DAAM2Q86T65 1068 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 NT5DC3Q86UY8 548 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 ECHDC2Q86YB7 292 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 C1orf131Q8NDD1 294 aaKnown RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 LINC01599Q8WXQ3 324 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 CPA5Q8WXQ8 436 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 ARMC5Q96C12 935 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 ZNF333Q96JL9 665 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 MRPL45Q9BRJ2 306 aaKnown RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 C11orf70Q9BRQ4 267 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 MRPL47Q9HD33 250 aaKnown RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 RNF19AQ9NV58 838 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 ADAM22Q9P0K1 906 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 STRIP2Q9ULQ0 834 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
VPS52-216ENST00000471309 TDRD15B5MCY1 1934 aaKnown RBP9.97□□□□□ -0.81
VPS52-216ENST00000471309 FAM170AA1A519 330 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 CTAGE15A4D2H0 777 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 MIF4GDA9UHW6 222 aaKnown RBP9.96□□□□□ -0.82
VPS52-216ENST00000471309 ABCB7O75027 752 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 SRGAP2O75044 1071 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 SLC34A2O95436 690 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 EOMESO95936 686 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 MYCP01106 439 aaPredicted RBP9.96□□□□□ -0.82
VPS52-216ENST00000471309 CTAGE8P0CG41 777 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 COL6A1P12109 1028 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 WARSP23381 471 aaKnown RBP9.96□□□□□ -0.82
VPS52-216ENST00000471309 PAX3P23760 479 aa9.96□□□□□ -0.82
VPS52-216ENST00000471309 MNX1P50219 401 aaPredicted RBP9.96□□□□□ -0.82
VPS52-216ENST00000471309 SCNN1GP51170 649 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms