RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 FKBP15Q5T1M5 1219 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 SLFN13Q68D06 897 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 FAM111BQ6SJ93 734 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 USP49Q70CQ1 688 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 MED25Q71SY5 747 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 DOK3Q7L591 496 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 SPATA5Q8NB90 893 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 STYXQ8WUJ0 223 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 TRIM63Q969Q1 353 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 TBC1D20Q96BZ9 403 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 ZC3H10Q96K80 434 aaKnown RBP4.91□□□□□ -1.62
VPS13A-209ENST00000467124 LMF1Q96S06 567 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 SORBS1Q9BX66 1292 aaKnown RBP4.91□□□□□ -1.62
VPS13A-209ENST00000467124 PLA2G12BQ9BX93 195 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 ZNF518BQ9C0D4 1074 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 USP40Q9NVE5 1235 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 C9orf78Q9NZ63 289 aaPredicted RBP4.91□□□□□ -1.62
VPS13A-209ENST00000467124 XPR1Q9UBH6 696 aa4.91□□□□□ -1.62
VPS13A-209ENST00000467124 A0A087WWL8 130 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 PRR5-ARHGAP8B1AHC4 643 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 H7C4K7 107 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 LAMTOR5O43504 91 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 AGR2O95994 175 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 AMHP03971 560 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 C8AP07357 584 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 ALAS1P13196 640 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 CR2P20023 1033 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 CHN2P52757 468 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 PPP2CBP62714 309 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 PPP2CAP67775 309 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 BOP1Q14137 746 aaKnown RBP4.9□□□□□ -1.63
VPS13A-209ENST00000467124 RALBP1Q15311 655 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 BMT2Q1RMZ1 405 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 METTL24Q5JXM2 366 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 NT5DC1Q5TFE4 455 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 TLDC1Q6P9B6 456 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 KCTD20Q7Z5Y7 419 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 LRRC56Q8IYG6 542 aaPredicted RBP4.9□□□□□ -1.63
VPS13A-209ENST00000467124 AOPEPQ8N6M6 819 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 GLIS1Q8NBF1 620 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 PDPRQ8NCN5 879 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 ATXN2LQ8WWM7 1075 aaKnown RBP4.9□□□□□ -1.63
VPS13A-209ENST00000467124 OR14A2Q96R54 314 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 NAP1L4Q99733 375 aaKnown RBP4.9□□□□□ -1.63
VPS13A-209ENST00000467124 EIF2AK1Q9BQI3 630 aaKnown RBP4.9□□□□□ -1.63
VPS13A-209ENST00000467124 STK33Q9BYT3 514 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 CPEB1Q9BZB8 566 aaKnown RBP4.9□□□□□ -1.63
VPS13A-209ENST00000467124 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.9□□□□□ -1.63
VPS13A-209ENST00000467124 MAGEH1Q9H213 219 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 SERHLQ9NQF3 203 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 ITM2CQ9NQX7 267 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 RLIMQ9NVW2 624 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 RRN3Q9NYV6 651 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 IGSF9Q9P2J2 1179 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 GPR52Q9Y2T5 361 aa4.9□□□□□ -1.63
VPS13A-209ENST00000467124 A0A087WZ62 844 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 DBX1A6NMT0 343 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 TLR5O60602 858 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 SKAP2O75563 359 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-209ENST00000467124 PIM1P11309 404 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-209ENST00000467124 YY1P25490 414 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 KCNAB1Q14722 419 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 POSTNQ15063 836 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 ZNF124Q15973 351 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 SLC4A8Q2Y0W8 1093 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 EFCAB12Q6NXP0 572 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 BEND5Q7L4P6 421 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 TAX1BP1Q86VP1 789 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 SIAH1Q8IUQ4 282 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 FITM2Q8N6M3 262 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 NLGN4YQ8NFZ3 816 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-209ENST00000467124 LTV1Q96GA3 475 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-209ENST00000467124 RMDN3Q96TC7 470 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 MPHOSPH9Q99550 1183 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 COLEC11Q9BWP8 271 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 GPR35Q9HC97 309 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
VPS13A-209ENST00000467124 VSX1Q9NZR4 365 aaPredicted RBP4.89□□□□□ -1.63
VPS13A-209ENST00000467124 SCAF8Q9UPN6 1271 aaKnown RBP4.89□□□□□ -1.63
VPS13A-209ENST00000467124 PLEKHM1Q9Y4G2 1056 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 SLC30A1Q9Y6M5 507 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 AATKQ6ZMQ8 1374 aa4.89□□□□□ -1.63
VPS13A-209ENST00000467124 CCDC78A2IDD5 438 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 M0R3H8 397 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 ACKR2O00590 384 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 NPC1O15118 1278 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 IPO13O94829 963 aaKnown RBP4.88□□□□□ -1.63
VPS13A-209ENST00000467124 ANXA1P04083 346 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 THP07101 528 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 INHBBP09529 407 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 TXNP10599 105 aaKnown RBP4.88□□□□□ -1.63
VPS13A-209ENST00000467124 FCER1AP12319 257 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 GNAT2P19087 354 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 KLRC1P26715 233 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 SLFN5Q08AF3 891 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 ELAVL1Q15717 326 aaKnown RBP4.88□□□□□ -1.63
VPS13A-209ENST00000467124 ZACNQ401N2 412 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 JMJD6Q6NYC1 403 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms