RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 STAM2O75886 525 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 CTSAP10619 480 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 ATP5JP18859 108 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 KLRC2P26717 231 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 NOVA1P51513 510 aaKnown RBP6.7□□□□□ -1.34
NCL-208ENST00000466274 CCR3P51677 355 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 LINC00310P59036 64 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 GPC5P78333 572 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 FAM189BP81408 668 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 SP2Q02086 613 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 GPATCH4Q5T3I0 446 aaKnown RBP6.7□□□□□ -1.34
NCL-208ENST00000466274 TSSK4Q6SA08 328 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 ZNF852Q6ZMS4 543 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 SLC39A11Q8N1S5 342 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 OXR1Q8N573 874 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 GIMAP8Q8ND71 665 aaPredicted RBP6.7□□□□□ -1.34
NCL-208ENST00000466274 GATAD2BQ8WXI9 593 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 RSPH1Q8WYR4 309 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 CLDN23Q96B33 292 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 KREMEN1Q96MU8 473 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 MYADMQ96S97 322 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 MRPL9Q9BYD2 267 aaKnown RBP6.7□□□□□ -1.34
NCL-208ENST00000466274 FAM49AQ9H0Q0 323 aaPredicted RBP6.7□□□□□ -1.34
NCL-208ENST00000466274 NAPBQ9H115 298 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 IL1RAPL2Q9NP60 686 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 COL20A1Q9P218 1284 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 REV1Q9UBZ9 1251 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 KLHL3Q9UH77 587 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 CEP295Q9C0D2 2601 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 CLUHO75153 1309 aa6.7□□□□□ -1.34
NCL-208ENST00000466274 GCN1Q92616 2671 aaKnown RBP6.7□□□□□ -1.34
NCL-208ENST00000466274 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 NLRC5Q86WI3 1866 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 CCDC195A0A1B0GUA6 201 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 FITM1A5D6W6 292 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 C9IYK1 514 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 N4BP1O75113 896 aaKnown RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 RPS6KA5O75582 802 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 CFBP00751 764 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 PDHBP11177 359 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 FGFR1P11362 822 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 LAMP2P13473 410 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 RDXP35241 583 aaKnown RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 NOVP48745 357 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 GALK1P51570 392 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 PPARAQ07869 468 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 ADCY1Q08828 1119 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 SLFN5Q08AF3 891 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 ZNF543Q08ER8 600 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 CDC37Q16543 378 aaPredicted RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 DAB2IPQ5VWQ8 1189 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 DIEXFQ68CQ4 756 aaKnown RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 MTSS1LQ765P7 747 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 CEP68Q76N32 757 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 ZNF605Q86T29 641 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 DDX53Q86TM3 631 aaKnown RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 LURAP1LQ8IV03 231 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 SLFN12Q8IYM2 578 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 IFNL3Q8IZI9 196 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 LILRA2Q8N149 483 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 TBC1D5Q92609 795 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 APPBP2Q92624 585 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 KIF1BPQ96EK5 621 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 CASD1Q96PB1 797 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 ZBP1Q9H171 429 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 TMX1Q9H3N1 280 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 IL17RBQ9NRM6 502 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 EXOC6BQ9Y2D4 811 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 POLR3KQ9Y2Y1 108 aaPredicted RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 MTF2Q9Y483 593 aaPredicted RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 SUPT16HQ9Y5B9 1047 aaKnown RBP6.69□□□□□ -1.34
NCL-208ENST00000466274 PCDHA2Q9Y5H9 948 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 NUMBLQ9Y6R0 609 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 KDM3AQ9Y4C1 1321 aa6.69□□□□□ -1.34
NCL-208ENST00000466274 MYOCOSA0A1B0GUC4 107 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 GPAA1O43292 621 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 FIBPO43427 364 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 NMT2O60551 498 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 DNAJA2O60884 412 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 ZFYP08048 801 aaPredicted RBP6.68□□□□□ -1.34
NCL-208ENST00000466274 INHBBP09529 407 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 ZNF806P0C7X5 589 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 PBX3P40426 434 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 METAP2P50579 478 aaKnown RBP eCLIP6.68□□□□□ -1.34
NCL-208ENST00000466274 HSD17B4P51659 736 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 CLCN4P51793 760 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 IGBP1P78318 339 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 TEKQ02763 1124 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 TRAF1Q13077 416 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 MTAPQ13126 283 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 HTR4Q13639 388 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 PGM5Q15124 567 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 TMEM266Q2M3C6 531 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 LRRC55Q6ZSA7 311 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 STOX1Q6ZVD7 989 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 SEPT1Q8WYJ6 367 aa6.68□□□□□ -1.34
NCL-208ENST00000466274 SMG7Q92540 1137 aaKnown RBP6.68□□□□□ -1.34
NCL-208ENST00000466274 INTS4Q96HW7 963 aaKnown RBP6.68□□□□□ -1.34
NCL-208ENST00000466274 LOXL4Q96JB6 756 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms