RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 ACBD6Q9BR61 282 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 ADAM7Q9H2U9 754 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 THAP9Q9H5L6 903 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 MAN1C1Q9NR34 630 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 TMEM63CQ9P1W3 806 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 L1RE1Q9UN81 338 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 SNX9Q9Y5X1 595 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 PLXNA3P51805 1871 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 TTC28Q96AY4 2481 aa14.71□□□□□ -0.05
LIMD1-203ENST00000465039 ZMYND10O75800 440 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 VNN1O95497 513 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 TRIM49P0CI25 452 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 TRIM49CP0CI26 452 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 EPCAMP16422 314 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 WARSP23381 471 aaKnown RBP14.7□□□□□ -0.06
LIMD1-203ENST00000465039 PIK3CAP42336 1068 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 MYL6P60660 151 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 MYL7Q01449 175 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 TSPY1Q01534 308 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 CETN1Q12798 172 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 MAPRE1Q15691 268 aaKnown RBP14.7□□□□□ -0.06
LIMD1-203ENST00000465039 NFE2Q16621 373 aaPredicted RBP14.7□□□□□ -0.06
LIMD1-203ENST00000465039 SOWAHAQ2M3V2 549 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 WDR72Q3MJ13 1102 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 ZNF667Q5HYK9 610 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 WSCD1Q658N2 575 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 CES5AQ6NT32 575 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 SYCE2Q6PIF2 218 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 ADGRF2Q8IZF7 708 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 KREMEN2Q8NCW0 462 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 ENOX1Q8TC92 643 aaKnown RBP14.7□□□□□ -0.06
LIMD1-203ENST00000465039 SUSD6Q92537 303 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 SRRTQ9BXP5 876 aaKnown RBP14.7□□□□□ -0.06
LIMD1-203ENST00000465039 DNAI2Q9GZS0 605 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 NAT10Q9H0A0 1025 aaKnown RBP14.7□□□□□ -0.06
LIMD1-203ENST00000465039 ABCB6Q9NP58 842 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 PRKAG3Q9UGI9 489 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 BARX2Q9UMQ3 279 aaPredicted RBP14.7□□□□□ -0.06
LIMD1-203ENST00000465039 XIRP2A4UGR9 3374 aa14.7□□□□□ -0.06
LIMD1-203ENST00000465039 WDR27A2RRH5 827 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 CAVIN2O95810 425 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 CST3P01034 146 aaPredicted RBP14.69□□□□□ -0.06
LIMD1-203ENST00000465039 HLA-DRAP01903 254 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 CPB1P15086 417 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 RPL17P18621 184 aaKnown RBP14.69□□□□□ -0.06
LIMD1-203ENST00000465039 MTHFRP42898 656 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 GCLMP48507 274 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 DLX2Q07687 328 aaPredicted RBP14.69□□□□□ -0.06
LIMD1-203ENST00000465039 SMAD2Q15796 467 aaKnown RBP14.69□□□□□ -0.06
LIMD1-203ENST00000465039 DCAF17Q5H9S7 520 aaPredicted RBP14.69□□□□□ -0.06
LIMD1-203ENST00000465039 TJAP1Q5JTD0 557 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 TCERG1LQ5VWI1 586 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 RSPO2Q6UXX9 243 aaPredicted RBP14.69□□□□□ -0.06
LIMD1-203ENST00000465039 DCP1BQ8IZD4 617 aaKnown RBP14.69□□□□□ -0.06
LIMD1-203ENST00000465039 EEF2KMTQ96G04 330 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 RIPOR3Q96MK2 946 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 MED15Q96RN5 788 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 NIF3L1Q9GZT8 377 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 ZCWPW1Q9H0M4 648 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 S1PR5Q9H228 398 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 CYP3A43Q9HB55 503 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 UNC80Q8N2C7 3258 aa14.69□□□□□ -0.06
LIMD1-203ENST00000465039 GRXCR2A6NFK2 248 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 ADAM12O43184 909 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 TRIM21P19474 475 aaKnown RBP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 EEF1GP26641 437 aaKnown RBP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 ELF1P32519 619 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 FMO5P49326 533 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 STX17P56962 302 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 NOP14P78316 857 aaKnown RBP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 PLD1Q13393 1074 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 TPD52L1Q16890 204 aaPredicted RBP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 PTCRAQ6ISU1 281 aaPredicted RBP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 CAVIN1Q6NZI2 390 aaKnown RBP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 LLGL2Q6P1M3 1020 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 GPR149Q86SP6 731 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 PALB2Q86YC2 1186 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 TMEM130Q8N3G9 435 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 OR10T2Q8NGX3 314 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 SPPL2BQ8TCT7 592 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 TAS1R2Q8TE23 839 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 KBTBD7Q8WVZ9 684 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 FUBP3Q96I24 572 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 FAM84AQ96KN4 292 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 CEP295NLQ96MC4 621 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 BPIFA3Q9BQP9 254 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 RTP3Q9BQQ7 232 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 BCO2Q9BYV7 579 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 RAB20Q9NX57 234 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 CDH9Q9ULB4 789 aa14.68□□□□□ -0.06
LIMD1-203ENST00000465039 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 TIMM13Q9Y5L4 95 aaPredicted RBP14.68□□□□□ -0.06
LIMD1-203ENST00000465039 GTPBP10A4D1E9 387 aaKnown RBP14.67□□□□□ -0.06
LIMD1-203ENST00000465039 SPDYE4A6NLX3 237 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 H3BQ06 376 aaPredicted RBP14.67□□□□□ -0.06
LIMD1-203ENST00000465039 MBTPS2O43462 519 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 XYLBO75191 536 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 C8AP07357 584 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 INCA1Q0VD86 236 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 CBX2Q14781 532 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms