RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 TBC1D7Q9P0N9 293 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 FBXO4Q9UKT5 387 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 SLC27A5Q9Y2P5 690 aa15.52■□□□□ 0.08
SNRNP40-203ENST00000463988 OTOGLQ3ZCN5 2332 aa15.52■□□□□ 0.07
SNRNP40-203ENST00000463988 A0A087X0B3 334 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 SHISA7A6NL88 538 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 KPNA7A9QM74 516 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 LMNAP02545 664 aaKnown RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 PDIA4P13667 645 aaKnown RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 IDEP14735 1019 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 CD72P21854 359 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 MLLT6P55198 1093 aaPredicted RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 GRM2Q14416 872 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 SV2CQ496J9 727 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 DNAJB7Q7Z6W7 309 aaPredicted RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 BRSK2Q8IWQ3 736 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 LINC00301Q8NCQ3 95 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 CACTINQ8WUQ7 758 aaKnown RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 ZNF560Q96MR9 790 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 TMEM209Q96SK2 561 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 PYM1Q9BRP8 204 aaKnown RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 FAM213AQ9BRX8 229 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 PANK2Q9BZ23 570 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 LRRC27Q9C0I9 530 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 TMEM206Q9H813 350 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 ZNF334Q9HCZ1 680 aaPredicted RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 PANK4Q9NVE7 773 aa15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 SPATA6Q9NWH7 488 aaPredicted RBP15.51■□□□□ 0.07
SNRNP40-203ENST00000463988 A0A1W2PRU2 124 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 KIAA0391O15091 583 aaKnown RBP15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 LAMTOR5O43504 91 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 PPP6R2O75170 966 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 GJA1P17302 382 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 TARSP26639 723 aaKnown RBP15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 WEE1P30291 646 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 GDI1P31150 447 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 VIPR2P41587 438 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 CASP5P51878 434 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 FZD5Q13467 585 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 STK38Q15208 465 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 SLC39A12Q504Y0 691 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 WSCD1Q658N2 575 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 MAMSTRQ6ZN01 415 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 CCDC65Q8IXS2 484 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 SYCP3Q8IZU3 236 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 ZNF687Q8N1G0 1237 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 SPPL2BQ8TCT7 592 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 TNMDQ9H2S6 317 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 CUEDC2Q9H467 287 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 SLITRK6Q9H5Y7 841 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 R4GN57 208 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 TSC2P49815 1807 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 FANCMQ8IYD8 2048 aa15.5■□□□□ 0.07
SNRNP40-203ENST00000463988 GPR179Q6PRD1 2367 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 COL4A3Q01955 1670 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 HEPACAM2A8MVW5 462 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 ZNF263O14978 683 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 SPTLC2O15270 562 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 EXTL3O43909 919 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 FCHO2Q0JRZ9 810 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 VEPH1Q14D04 833 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 C1orf228Q6PIY5 440 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 STXBP4Q6ZWJ1 553 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 GAREM2Q75VX8 874 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 DCP1BQ8IZD4 617 aaKnown RBP15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 TTC9BQ8N6N2 239 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 LRRC52Q8N7C0 313 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 KCNG4Q8TDN1 519 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 SNX21Q969T3 373 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 SAAL1Q96ER3 474 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 MSANTD3Q96H12 275 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 ZNF396Q96N95 335 aaPredicted RBP15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 IER2Q9BTL4 223 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 FOXD4L1Q9NU39 408 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 KBTBD4Q9NVX7 518 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 OBP2AQ9NY56 170 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 RBAKQ9NYW8 714 aaPredicted RBP15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 ZMYM5Q9UJ78 669 aa15.49■□□□□ 0.07
SNRNP40-203ENST00000463988 ARNTLO00327 626 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 CHADO15335 359 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 SOAT2O75908 522 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 YEATS4O95619 227 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 TFAMQ00059 246 aaKnown RBP15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 AMPD3Q01432 767 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 E2F4Q16254 413 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 ARHGAP15Q53QZ3 475 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 CNNM4Q6P4Q7 775 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 LRRTM3Q86VH5 581 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 ARID3BQ8IVW6 561 aaPredicted RBP15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 YAF2Q8IY57 180 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 PDILTQ8N807 584 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 C1orf127Q8N9H9 656 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 SPATA18Q8TC71 538 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 SEPT5Q99719 369 aaPredicted RBP15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 CBWD1Q9BRT8 395 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 MKNK1Q9BUB5 465 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 ATXN3LQ9H3M9 355 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 ITGA11Q9UKX5 1188 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 AGAP1Q9UPQ3 857 aa15.48■□□□□ 0.07
SNRNP40-203ENST00000463988 PIAS3Q9Y6X2 628 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms