RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 ABI1Q8IZP0 508 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 LRRC43Q8N309 656 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 LRRC52Q8N7C0 313 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 COLGALT1Q8NBJ5 622 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 SHC3Q92529 594 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 LPPQ93052 612 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 PPP2R3CQ969Q6 453 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 HPDLQ96IR7 371 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 ZMAT2Q96NC0 199 aaKnown RBP16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 NECAB3Q96P71 396 aaPredicted RBP16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 GAD1Q99259 594 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 CHP1Q99653 195 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 NHEJ1Q9H9Q4 299 aaPredicted RBP16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 AJAP1Q9UKB5 411 aaPredicted RBP16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 PYCARDQ9ULZ3 195 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 LZTS1Q9Y250 596 aa16.25■□□□□ 0.19
TMEM39A-203ENST00000461654 SSU72P8A0A1W2PR75 194 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 GRXCR2A6NFK2 248 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 ARL5CA6NH57 179 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 FOXN3O00409 490 aaPredicted RBP16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 FGF18O76093 207 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 STAU1O95793 577 aaKnown RBP16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 ANXA13P27216 316 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 EIF4A3P38919 411 aaKnown RBP16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 PRKCIP41743 596 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 BPIFB4P59827 614 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 TNNC1P63316 161 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 ADAM15Q13444 863 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 SPA17Q15506 151 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 WDR72Q3MJ13 1102 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 CLLU1OSQ5K130 101 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 GLB1LQ6UWU2 654 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 KIAA1524Q8TCG1 905 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 URGCPQ8TCY9 931 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 ZNF560Q96MR9 790 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 KREMEN1Q96MU8 473 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 VRTNQ9H8Y1 702 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 LUC7LQ9NQ29 371 aaKnown RBP16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 TUBGCP4Q9UGJ1 667 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 SIX4Q9UIU6 781 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 NUB1Q9Y5A7 615 aa16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 EPN1Q9Y6I3 576 aaPredicted RBP16.24■□□□□ 0.19
TMEM39A-203ENST00000461654 TTC28Q96AY4 2481 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 CARNS1A5YM72 827 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 NDUFA10O95299 355 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 CCDC175P0C221 793 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 IRS1P35568 1242 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 GUCY2FP51841 1108 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 KRT83P78385 493 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 E4F1Q66K89 784 aaPredicted RBP16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 PTCRAQ6ISU1 281 aaPredicted RBP16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 KCNT2Q6UVM3 1135 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 AGMOQ6ZNB7 445 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 IRF2BP2Q7Z5L9 587 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 FAM71AQ8IYT1 594 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 TXLNBQ8N3L3 684 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 TTC39CQ8N584 583 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 KAT5Q92993 513 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 C18orf25Q96B23 403 aaPredicted RBP16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 ZFP42Q96MM3 310 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 MRPL9Q9BYD2 267 aaKnown RBP16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 DNAI2Q9GZS0 605 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 XYLT2Q9H1B5 865 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 APOBEC3GQ9HC16 384 aaKnown RBP16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 CLDND1Q9NY35 253 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 ARHGAP20Q9P2F6 1191 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 HCSTQ9UBK5 93 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 PCDHB4Q9Y5E5 795 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 KIAA1671Q9BY89 1806 aa16.23■□□□□ 0.19
TMEM39A-203ENST00000461654 H3BQ06 376 aaPredicted RBP16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 PTGESO14684 152 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 FSCN2O14926 492 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 PPM1AP35813 382 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 GRIK3Q13003 919 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 SV2CQ496J9 727 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 C9orf57Q5W0N0 161 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 HGSNATQ68CP4 663 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 RAD9BQ6WBX8 426 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 GPIHBP1Q8IV16 184 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 EFHBQ8N7U6 833 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 ELMO3Q96BJ8 720 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 ZNF558Q96NG5 402 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 PPP1R10Q96QC0 940 aaKnown RBP16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 GPR88Q9GZN0 384 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 CXCL16Q9H2A7 254 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 FAM124BQ9H5Z6 455 aaPredicted RBP16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 HAUS4Q9H6D7 363 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 CYP3A43Q9HB55 503 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 TLR9Q9NR96 1032 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 KANSL3Q9P2N6 904 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 PUF60Q9UHX1 559 aaKnown RBP16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 FAM50BQ9Y247 325 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 INPP5FQ9Y2H2 1132 aa16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 TCF20Q9UGU0 1960 aaKnown RBP16.22■□□□□ 0.19
TMEM39A-203ENST00000461654 ANO9A1A5B4 782 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 GOLGA6L9A6NEM1 432 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms