RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 KYNUQ16719 465 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 SPRED3Q2MJR0 410 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 LLGL2Q6P1M3 1020 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 SPOCD1Q6ZMY3 1216 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 GBP7Q8N8V2 638 aaPredicted RBP13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 MAML1Q92585 1016 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 SGSM3Q96HU1 749 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 FAM84AQ96KN4 292 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 CFAP57Q96MR6 1250 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 PTPRHQ9HD43 1115 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 KLC4Q9NSK0 619 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 SENP1Q9P0U3 644 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 STRIP2Q9ULQ0 834 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 SHOC2Q9UQ13 582 aa13.24□□□□□ -0.29
ECHDC1-209ENST00000454591 SOWAHBA6NEL2 793 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 CFAP73A6NFT4 308 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 SMIM23A6NLE4 172 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 SMAPO00193 183 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 IRF6O14896 467 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 GJB6O95452 261 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 MAGEA4P43358 317 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 CNTN2Q02246 1040 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 SP4Q02446 784 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 DUOXA2Q1HG44 320 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ZC3H12AQ5D1E8 599 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ANGEL2Q5VTE6 544 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 DNAJC24Q6P3W2 148 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 PPP1R21Q6ZMI0 780 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 RGS9BPQ6ZS82 235 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 TSHZ1Q6ZSZ6 1077 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 PLPPR4Q7Z2D5 763 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 TRPM8Q7Z2W7 1104 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 FUKQ8N0W3 1084 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 UHMK1Q8TAS1 419 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 GRAMD1AQ96CP6 724 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 MAGEB18Q96M61 343 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 HEMGNQ9BXL5 484 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 PCDH9Q9HC56 1237 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ANKFY1Q9P2R3 1169 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 PRKAG3Q9UGI9 489 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 USP15Q9Y4E8 981 aaPredicted RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 CHUKO15111 745 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ALOX15BO15296 676 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 MAGEB2O15479 319 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 PRPF4O43172 522 aaKnown RBP eCLIP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 MGRN1O60291 552 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 CST3P01034 146 aaPredicted RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 HOXC6P09630 235 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 TSHRP16473 764 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 CD58P19256 250 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 CDKN2BP42772 138 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 SLC26A2P50443 739 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 POU5F1BQ06416 359 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ACVR2BQ13705 512 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ACAP1Q15027 740 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 GALNTL6Q49A17 601 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 TFDP3Q5H9I0 405 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ARHGEF18Q6ZSZ5 1173 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 PASD1Q8IV76 773 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 ZBTB8OSQ8IWT0 167 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 WDTC1Q8N5D0 677 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 SLC35B2Q8TB61 432 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 PRPF31Q8WWY3 499 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 NFKBIZQ9BYH8 718 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 BCO2Q9BYV7 579 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 XYLT2Q9H1B5 865 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 FZD8Q9H461 694 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 SSU72Q9NP77 194 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 CISHQ9NSE2 258 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 WDR35Q9P2L0 1181 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 RGS17Q9UGC6 210 aaPredicted RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 TPX2Q9ULW0 747 aaKnown RBP13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 NAALADL1Q9UQQ1 740 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 SNCAIPQ9Y6H5 919 aa13.23□□□□□ -0.29
ECHDC1-209ENST00000454591 C3orf70A6NLC5 250 aaPredicted RBP13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 SIGLEC16A6NMB1 481 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 MGAMO43451 1857 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 SUN1O94901 812 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 IL18RAPO95256 599 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 KRT1P04264 644 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 PRKCBP05771 671 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 VIMP08670 466 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 BRAFP15056 766 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 POLR2BP30876 1174 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 MYL6P60660 151 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 RPL7AP62424 266 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 OGDHQ02218 1023 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 FSTL1Q12841 308 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 RIPK1Q13546 671 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 MAPK6Q16659 721 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 C2CD6Q53TS8 623 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 TMEM63BQ5T3F8 832 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 RNASEH2BQ5TBB1 312 aaKnown RBP13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 CYB5D1Q6P9G0 228 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 MPZL3Q6UWV2 235 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 PCGF5Q86SE9 256 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 TTC13Q8NBP0 860 aa13.22□□□□□ -0.29
ECHDC1-209ENST00000454591 RBM15Q96T37 977 aaKnown RBP eCLIP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms