RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 WDR72Q3MJ13 1102 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 XKR3Q5GH77 459 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 OLFML2BQ68BL8 750 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 GJB7Q6PEY0 223 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 PDCD6IPQ8WUM4 868 aaKnown RBP12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ATXN7L3BQ96GX2 97 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ZNF668Q96K58 619 aaPredicted RBP12.59□□□□□ -0.39
SEC16A-207ENST00000453963 DACH2Q96NX9 599 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 TRIM62Q9BVG3 475 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 FRMD8P1Q9BZ68 369 aaPredicted RBP12.59□□□□□ -0.39
SEC16A-207ENST00000453963 CDC42EP4Q9H3Q1 356 aaKnown RBP12.59□□□□□ -0.39
SEC16A-207ENST00000453963 SEMA6BQ9H3T3 888 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ZNF446Q9NWS9 450 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 CLTCQ00610 1675 aaKnown RBP12.59□□□□□ -0.39
SEC16A-207ENST00000453963 A8MXQ7 604 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 DAB1O75553 588 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 TMCC1O94876 653 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
SEC16A-207ENST00000453963 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
SEC16A-207ENST00000453963 GZMAP12544 262 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 STAT5BP51692 787 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 RNF135Q8IUD6 432 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ZNF280CQ8ND82 737 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 RIT2Q99578 217 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 PACSIN1Q9BY11 444 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ELP3Q9H9T3 547 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ZC4H2Q9NQZ6 224 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 ZNF212Q9UDV6 495 aa12.59□□□□□ -0.39
SEC16A-207ENST00000453963 AGLP35573 1532 aa12.58□□□□□ -0.39
SEC16A-207ENST00000453963 TXNP10599 105 aaKnown RBP12.58□□□□□ -0.4
SEC16A-207ENST00000453963 NNMTP40261 264 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 MFSD14CQ5VZR4 134 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 KIF17Q9P2E2 1029 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 TRIM49D1C9J1S8 452 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
SEC16A-207ENST00000453963 HLA-DRAP01903 254 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 KRT16P08779 473 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 CALB2P22676 271 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 PTPN4P29074 926 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 STIP1P31948 543 aaKnown RBP12.58□□□□□ -0.4
SEC16A-207ENST00000453963 MKRN4PQ13434 485 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-207ENST00000453963 CATSPER3Q86XQ3 398 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 SLC16A10Q8TF71 515 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 FAM118BQ9BPY3 351 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 MMTAG2Q9BU76 263 aaKnown RBP12.58□□□□□ -0.4
SEC16A-207ENST00000453963 JMJD4Q9H9V9 463 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 AGPAT3Q9NRZ7 376 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 NSMCE4AQ9NXX6 385 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 POLIQ9UNA4 740 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 DTNAQ9Y4J8 743 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 MYL2P10916 166 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 PTENP60484 403 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 TTC23LQ6PF05 361 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 GALNT4Q8N4A0 578 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 ADNPQ9H2P0 1102 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 PRR12Q9ULL5 1215 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 CDYLQ9Y232 598 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 LOC100653049A0A140TA62 436 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 KRT34O76011 436 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 STYK1Q6J9G0 422 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 LRRC6Q86X45 466 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 EIF1ADQ8N9N8 165 aaKnown RBP12.58□□□□□ -0.4
SEC16A-207ENST00000453963 ZNF555Q8NEP9 628 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 ZBTB10Q96DT7 871 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 KAZALD1Q96I82 304 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 ZNF560Q96MR9 790 aa12.58□□□□□ -0.4
SEC16A-207ENST00000453963 C20orf96Q9NUD7 363 aaPredicted RBP12.58□□□□□ -0.4
SEC16A-207ENST00000453963 C3orf70A6NLC5 250 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 UBE2Q2LH0YL09 131 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 FOXN3O00409 490 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 SRP72O76094 671 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 PSMD7P51665 324 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 MAP3K10Q02779 954 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 ANGEL2Q5VTE6 544 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 ATP8B4Q8TF62 1192 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 MTMR8Q96EF0 704 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 FAM111AQ96PZ2 611 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 TMEM51Q9NW97 253 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 MAD2L2Q9UI95 211 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 KDM6AO15550 1401 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 GPR75-ASB3A0A0A6YYF3 556 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 SRRM3A6NNA2 597 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 ACOT2P49753 483 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 USP10Q14694 798 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 WASHC2DQ5SRD0 308 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 URGCPQ8TCY9 931 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 ATXN2LQ8WWM7 1075 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 TSPAN17Q96FV3 270 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 EPAS1Q99814 870 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 HACD3Q9P035 362 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 DAB2P98082 770 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 OVGP1Q12889 678 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 SMAD1Q15797 465 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 YTHDF3Q7Z739 585 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 KIAA2013Q8IYS2 634 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 PPHLN1Q8NEY8 458 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 TASP1Q9H6P5 420 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms