RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 LRPAP1P30533 357 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 NSFP46459 744 aaKnown RBP12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 AMPD2Q01433 879 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 CENPCQ03188 943 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 PDE4CQ08493 712 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 INCA1Q0VD86 236 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 GPNMBQ14956 572 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 TRIM60Q495X7 471 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 LLGL2Q6P1M3 1020 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 DPH6Q7L8W6 267 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 C1orf131Q8NDD1 294 aaKnown RBP12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 PGBD4Q96DM1 585 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 TMEM176AQ96HP8 235 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 SCLYQ96I15 445 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 CTTNBP2NLQ9P2B4 639 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 BARX2Q9UMQ3 279 aaPredicted RBP12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 PACSIN2Q9UNF0 486 aaPredicted RBP12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 JRKLQ9Y4A0 524 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 NME7Q9Y5B8 376 aa12.21□□□□□ -0.46
SMPD4P2-201ENST00000440167 FNDC1Q4ZHG4 1894 aaPredicted RBP12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 CASTOR2A6NHX0 329 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 KPNA7A9QM74 516 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 PAEPP09466 180 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 DNA2P51530 1060 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 SOWAHAQ2M3V2 549 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 TCTN1Q2MV58 587 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 SV2CQ496J9 727 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 DENND1BQ6P3S1 775 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 TRIM72Q6ZMU5 477 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 ZNF598Q86UK7 904 aaKnown RBP12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 MCOLN2Q8IZK6 566 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 HEXIM2Q96MH2 286 aaKnown RBP12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 PSMB7Q99436 277 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 C11orf70Q9BRQ4 267 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 CARD6Q9BX69 1037 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 PPP1R12CQ9BZL4 782 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 SLC38A7Q9NVC3 462 aa12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 CNOT8Q9UFF9 292 aaKnown RBP12.2□□□□□ -0.46
SMPD4P2-201ENST00000440167 C9IYK1 514 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 PODXLO00592 558 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 CYP1A2P05177 515 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 FGFR1P11362 822 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 SKIP12755 728 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 PNPLA4P41247 253 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 CLCNKBP51801 687 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 CCL23P55773 120 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 LILRA4P59901 499 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 IFI16Q16666 785 aaKnown RBP12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 PAPD7Q5XG87 772 aaKnown RBP12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 MON1BQ7L1V2 547 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 DAAM2Q86T65 1068 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 RHOT2Q8IXI1 618 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 LRRC57Q8N9N7 239 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 DBF4BQ8NFT6 615 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 OR6B3Q8NGW1 331 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 KBTBD7Q8WVZ9 684 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 BTBD6Q96KE9 485 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 CAPZA3Q96KX2 299 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 LPIN3Q9BQK8 851 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 PAAF1Q9BRP4 392 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 NUP85Q9BW27 656 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 NT5C1AQ9BXI3 368 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 TLR10Q9BXR5 811 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 CDC23Q9UJX2 597 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 GTF3C4Q9UKN8 822 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 PCDHGC3Q9UN70 934 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 L1RE1Q9UN81 338 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 HYOU1Q9Y4L1 999 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 SAR1BQ9Y6B6 198 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 TMEM110-MUSTN1A8MSY1 372 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 PITPNM1O00562 1244 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 ZNF185O15231 689 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 MED7O43513 233 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 BUB1BO60566 1050 aaPredicted RBP12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 HSPA1AP0DMV8 641 aaKnown RBP12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 HSPA1BP0DMV9 641 aaKnown RBP12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 VDRP11473 427 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 RRM1P23921 792 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 TLE2Q04725 743 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 FAAP100Q0VG06 881 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 MEI1Q5TIA1 1274 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 MMS22LQ6ZRQ5 1243 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 SLC24A5Q71RS6 500 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 ANKRD33Q7Z3H0 272 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 ACOT1Q86TX2 421 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 OSTM1Q86WC4 334 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 WDTC1Q8N5D0 677 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 C12orf29Q8N999 325 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 C3orf58Q8NDZ4 430 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 ZNF564Q8TBZ8 553 aaPredicted RBP12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 WNT8AQ9H1J5 351 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 HIPK3Q9H422 1215 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 DPEP3Q9H4B8 488 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 GDAP2Q9NXN4 497 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 ADAM22Q9P0K1 906 aa12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMPD4P2-201ENST00000440167 CYTH4Q9UIA0 394 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms