RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 IL6STP40189 918 aaPredicted RBP7.09□□□□□ -1.27
USP54-206ENST00000433394 WNT3P56703 355 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 DUSP8Q13202 625 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 SLC29A2Q14542 456 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 MPEG1Q2M385 716 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 SLC35G1Q2M3R5 365 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 DCAF17Q5H9S7 520 aaPredicted RBP7.09□□□□□ -1.27
USP54-206ENST00000433394 FOXR2Q6PJQ5 311 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 MICU3Q86XE3 530 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 MB21D1Q8N884 522 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 FAM46DQ8NEK8 389 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 MIEF2Q96C03 454 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 ADAM7Q9H2U9 754 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 AGO4Q9HCK5 861 aaKnown RBP7.09□□□□□ -1.27
USP54-206ENST00000433394 TBC1D23Q9NUY8 699 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 XPR1Q9UBH6 696 aa7.09□□□□□ -1.27
USP54-206ENST00000433394 GOLGA6L3A6NEY3 463 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 CLCA1A8K7I4 914 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 GOLGA6L6A8MZA4 724 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 POLRMTO00411 1230 aaKnown RBP7.08□□□□□ -1.28
USP54-206ENST00000433394 WNT10BO00744 389 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 CSTBP04080 98 aaKnown RBP7.08□□□□□ -1.28
USP54-206ENST00000433394 SPATA31D3P0C874 917 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 IL1R2P27930 398 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 VIPR2P41587 438 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 ALDH9A1P49189 494 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 MGAT5BQ3V5L5 792 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 DCAF12L1Q5VU92 463 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 SPATA31D4Q6ZUB0 917 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 RFX8Q6ZV50 586 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 ELOA2Q8IYF1 753 aaPredicted RBP7.08□□□□□ -1.28
USP54-206ENST00000433394 MDGA1Q8NFP4 955 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 ATXN2LQ8WWM7 1075 aaKnown RBP7.08□□□□□ -1.28
USP54-206ENST00000433394 MAML1Q92585 1016 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 LRRC46Q96FV0 321 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 PNKPQ96T60 521 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 SPATA5L1Q9BVQ7 753 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 LSM14BQ9BX40 385 aaKnown RBP7.08□□□□□ -1.28
USP54-206ENST00000433394 STK33Q9BYT3 514 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 HEYLQ9NQ87 328 aaPredicted RBP7.08□□□□□ -1.28
USP54-206ENST00000433394 SLC39A10Q9ULF5 831 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 SLC45A2Q9UMX9 530 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 SHOC2Q9UQ13 582 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 CDYLQ9Y232 598 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 MAN2B2Q9Y2E5 1009 aa7.08□□□□□ -1.28
USP54-206ENST00000433394 PNPLA7Q6ZV29 1317 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 LOC102723971A0A1B0GUV8 181 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 PODXLO00592 558 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 PLA2G6O60733 806 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 RAD17O75943 681 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 DNAJB5O75953 348 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 TXNP10599 105 aaKnown RBP7.07□□□□□ -1.28
USP54-206ENST00000433394 SLC6A4P31645 630 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 MSX2P35548 267 aaPredicted RBP7.07□□□□□ -1.28
USP54-206ENST00000433394 POU5F1BQ06416 359 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 IQCB1Q15051 598 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 CRB2Q5IJ48 1285 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 GGT6Q6P531 493 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 TLDC1Q6P9B6 456 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 USP17L6PQ6QN14 398 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 GLB1LQ6UWU2 654 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 GPRIN1Q7Z2K8 1008 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 POLNQ7Z5Q5 900 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 SGMS1Q86VZ5 419 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 NKAPQ8N5F7 415 aaKnown RBP7.07□□□□□ -1.28
USP54-206ENST00000433394 MYCT1Q8N699 235 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 TMIEQ8NEW7 156 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 OR52N2Q8NGI0 321 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 KLHL32Q96NJ5 620 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 UBA5Q9GZZ9 404 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 CHST8Q9H2A9 424 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 LUZP4Q9P127 313 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 GTF2A1LQ9UNN4 478 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 ATP11BQ9Y2G3 1177 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 NEU2Q9Y3R4 380 aa7.07□□□□□ -1.28
USP54-206ENST00000433394 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 DRGXA6NNA5 263 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 SOAT2O75908 522 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 KIF20AO95235 890 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 ATXN1LP0C7T5 689 aaKnown RBP7.06□□□□□ -1.28
USP54-206ENST00000433394 HK1P19367 917 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 CHN2P52757 468 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 KRT17Q04695 432 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 ZACNQ401N2 412 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 HS1BP3Q53T59 392 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 CIR1Q86X95 450 aaPredicted RBP7.06□□□□□ -1.28
USP54-206ENST00000433394 PDPRQ8NCN5 879 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 PNISRQ8TF01 805 aaKnown RBP7.06□□□□□ -1.28
USP54-206ENST00000433394 RAPGEF4Q8WZA2 1011 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 FAM89AQ96GI7 184 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 SNX27Q96L92 541 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 ISCA1Q9BUE6 129 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 RNPEPQ9H4A4 650 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 RNF181Q9P0P0 153 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.06□□□□□ -1.28
USP54-206ENST00000433394 SH3BP1Q9Y3L3 701 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 SLC30A1Q9Y6M5 507 aa7.06□□□□□ -1.28
USP54-206ENST00000433394 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 CAPN14A8MX76 684 aa7.05□□□□□ -1.28
USP54-206ENST00000433394 DIRC3C9JPN6 131 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms