RNA–Protein interactions for RNA: ENST00000428966.1

PABPC1P11-201, Transcript of poly(A) binding protein cytoplasmic 1 pseudogene 11, humanhuman

BASIC

Gene PABPC1P11, Length 2,007 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1P11-201ENST00000428966 CCDC151A5D8V7 595 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 H3BQ06 376 aaPredicted RBP12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 TEX28O15482 410 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 XPOTO43592 962 aaKnown RBP12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 TUBBP07437 444 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 RPL17P18621 184 aaKnown RBP12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 TKTP29401 623 aaKnown RBP12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 CASP14P31944 242 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 TFAMQ00059 246 aaKnown RBP12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 ZCWPW2Q504Y3 356 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 PRSS55Q6UWB4 352 aaPredicted RBP12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 BEST2Q8NFU1 509 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 CXorf38Q8TB03 319 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 CPLX3Q8WVH0 158 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 RIN2Q8WYP3 895 aaPredicted RBP12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 EEF2KMTQ96G04 330 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 PARD6BQ9BYG5 372 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 KIAA1586Q9HCI6 787 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 CLEC1BQ9P126 229 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 COG5Q9UP83 839 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 NUB1Q9Y5A7 615 aa12.48□□□□□ -0.41
PABPC1P11-201ENST00000428966 PIRO00625 290 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 SPTLC1O15269 473 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 EXOC3O60645 756 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 CLASP2O75122 1294 aaKnown RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 NR3C1P04150 777 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 FGFR3P22607 806 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 CASP4P49662 377 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 CYP24A1Q07973 514 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 ELAVL2Q12926 359 aaKnown RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 MTF1Q14872 753 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 C9orf57Q5W0N0 161 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 LLGL2Q6P1M3 1020 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 NT5DC4Q86YG4 428 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 SLC9A9Q8IVB4 645 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 C1orf127Q8N9H9 656 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 OR5B17Q8NGF7 314 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 LNX1Q8TBB1 728 aaPredicted RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 KLHL5Q96PQ7 755 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 POP1Q99575 1024 aaKnown RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 CDCA3Q99618 268 aaPredicted RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 MTMR12Q9C0I1 747 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 RXFP1Q9HBX9 757 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 LZTFL1Q9NQ48 299 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 DPP3Q9NY33 737 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 BARX2Q9UMQ3 279 aaPredicted RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 TRAPPC3O43617 180 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 NCK2O43639 380 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 GYPCP04921 128 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 PMS1P54277 932 aaKnown RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 LILRA4P59901 499 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 GPS2Q13227 327 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 KRT31Q15323 416 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 ADSSL1Q8N142 457 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 PLEKHO2Q8TD55 490 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 HNRNPLLQ8WVV9 542 aaKnown RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 CCDC127Q96BQ5 260 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 SUSD3Q96L08 255 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 CALCOCO1Q9P1Z2 691 aa12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.47□□□□□ -0.41
PABPC1P11-201ENST00000428966 ERLIN1O75477 346 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 DLATP10515 647 aaKnown RBP12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 EPCAMP16422 314 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 NR2F2P24468 414 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 NDUFV1P49821 464 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 KCNQ1P51787 676 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 TCP11X2Q5H9J9 407 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 ZNF569Q5MCW4 686 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 TMEM184AQ6ZMB5 413 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 GLYCTKQ8IVS8 523 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 GPR65Q8IYL9 337 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 NELFBQ8WX92 580 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 MSLNLQ96KJ4 702 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 MFSD14AQ96MC6 490 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 CLSTN3Q9BQT9 956 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 EMILIN2Q9BXX0 1053 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 ABHD10Q9NUJ1 306 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 SIX4Q9UIU6 781 aa12.46□□□□□ -0.41
PABPC1P11-201ENST00000428966 PDCD11Q14690 1871 aaKnown RBP12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 KCNJ18B7U540 433 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 M0QZQ0 153 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 ADAM12O43184 909 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 CALUO43852 315 aaPredicted RBP12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 AKAP3O75969 853 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 SEC31AO94979 1220 aaKnown RBP12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 ITGB3P05106 788 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 KLRC2P26717 231 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 CLCN4P51793 760 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 STIM1Q13586 685 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 KCNJ12Q14500 433 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 PSMD6Q15008 389 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 CLUL1Q15846 466 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 PSMD5Q16401 504 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 NFIL3Q16649 462 aa12.45□□□□□ -0.42
PABPC1P11-201ENST00000428966 WHAMMP3Q1A5X7 153 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms