RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 ERICH1Q86X53 443 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 KATNAL2Q8IYT4 538 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 FBXO25Q8TCJ0 367 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 MCEEQ96PE7 176 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 HERPUD2Q9BSE4 406 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 SDCBP2Q9H190 292 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 ASB7Q9H672 318 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 SMYD3Q9H7B4 428 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 PARP2Q9UGN5 583 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZNF236Q9UL36 1845 aa14.85□□□□□ -0.03
APOBEC3D-202ENST00000427494 TMEM191CA6NGB0 347 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 SLC15A5A6NIM6 579 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ADCY6O43306 1168 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 MED7O43513 233 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 RALAP11233 206 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 CDH5P33151 784 aaPredicted RBP14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZNF844Q08AG5 666 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 TMEM132DQ14C87 1099 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 SLC10A6Q3KNW5 377 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 CYP4A22Q5TCH4 519 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 DCUN1D2Q6PH85 259 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 KIAA0319LQ8IZA0 1049 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 WDTC1Q8N5D0 677 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ATG4AQ8WYN0 398 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ATP6V1G3Q96LB4 118 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 HEMGNQ9BXL5 484 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 TXLNGYQ9BZA5 131 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 CENPHQ9H3R5 247 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 TMBIM4Q9HC24 238 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 CHST7Q9NS84 486 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 TCRBV5S1A1TA0A578 114 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 MYZAPP0CAP1 466 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 FGFR4P22455 802 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 POLR2BP30876 1174 aaKnown RBP14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ATICP31939 592 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 RAD23BP54727 409 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 KRT17Q04695 432 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ORC1Q13415 861 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ZSCAN26Q16670 478 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 SMYD5Q6GMV2 418 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 ADPGKQ9BRR6 497 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 CAPS2Q9BXY5 557 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 DCLK3Q9C098 648 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 SETD4Q9NVD3 440 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 SLC5A4Q9NY91 659 aa14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 MTRF1LQ9UGC7 380 aaKnown RBP14.84□□□□□ -0.03
APOBEC3D-202ENST00000427494 CITO14578 2027 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 HMGB1P1B2RPK0 211 aaPredicted RBP14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 SHOX2O60902 331 aaPredicted RBP14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 PAEPP09466 180 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 ZNF252P-AS1Q0IIN9 211 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 SPDYCQ5MJ68 293 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 ILDR2Q71H61 639 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 ZNF410Q86VK4 478 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 EXD1Q8NHP7 514 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 CXorf38Q8TB03 319 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 SLCO2A1Q92959 643 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 FAXDC2Q96IV6 333 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 ACAP3Q96P50 834 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 CPA4Q9UI42 421 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 LCMT1Q9UIC8 334 aa14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 R3HDM2Q9Y2K5 976 aaKnown RBP14.83□□□□□ -0.04
APOBEC3D-202ENST00000427494 P4HA1P13674 534 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 PMS2P54278 862 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 SKOR1P84550 965 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 TAP1Q03518 808 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 KIZQ2M2Z5 673 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 ZFYVE27Q5T4F4 411 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 SLC4A11Q8NBS3 891 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 GRK7Q8WTQ7 553 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 HPDLQ96IR7 371 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 FAM49AQ9H0Q0 323 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 RRAGCQ9HB90 399 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 KLHL11Q9NVR0 708 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 HMGXB4Q9UGU5 601 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 STRIP2Q9ULQ0 834 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 AGAP1Q9UPQ3 857 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 A0A1B0GUA9 196 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 RRN3P2A6NIE6 340 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 GOLGA8SH3BPF8 625 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 DYNC1LI2O43237 492 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 RPS6KA5O75582 802 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 KRT1P04264 644 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 TCF4P15884 667 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 NR1D1P20393 614 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 ATP1A2P50993 1020 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 HNRNPH2P55795 449 aaKnown RBP14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 OGDHQ02218 1023 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 PTPN11Q06124 597 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 IFFO1Q0D2I5 559 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 TMEM62Q0P6H9 643 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 KLF1Q13351 362 aaPredicted RBP14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 PTPN20Q4JDL3 420 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 PPP1R15BQ5SWA1 713 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 PRAMEF19Q5SWL8 479 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 LRRC31Q6UY01 552 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 KDM7AQ6ZMT4 941 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 RUFY4Q6ZNE9 571 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 C3orf20Q8ND61 904 aa14.82□□□□□ -0.04
APOBEC3D-202ENST00000427494 ART4Q93070 314 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms