RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 CBX6O95503 412 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 SERPING1P05155 500 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 PAEPP09466 180 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 FAM228BP0C875 321 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 ACOT2P49753 483 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 CLCN3P51790 818 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 ZNF662Q6ZS27 426 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 ANO5Q75V66 913 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 CFAP61Q8NHU2 1237 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 U2AF1L4Q8WU68 220 aaKnown RBP16.85■□□□□ 0.29
PKP4-205ENST00000426248 CBWD1Q9BRT8 395 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 IQCGQ9H095 443 aaKnown RBP16.85■□□□□ 0.29
PKP4-205ENST00000426248 SUCLA2Q9P2R7 463 aaPredicted RBP16.85■□□□□ 0.29
PKP4-205ENST00000426248 MAGEA13PA6NCF6 341 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 ZSCAN9O15535 394 aaPredicted RBP16.85■□□□□ 0.29
PKP4-205ENST00000426248 CLDN3O15551 220 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 AGTP01019 485 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 ACTN1P12814 892 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 MXI1P50539 228 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 CDR2Q01850 454 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 BNIP1Q12981 228 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 PDXDC1Q6P996 788 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 ISLR2Q6UXK2 745 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 R3HDMLQ9H3Y0 253 aa16.85■□□□□ 0.29
PKP4-205ENST00000426248 KCNA2P16389 499 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 ALCAMQ13740 583 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 PDE1CQ14123 709 aaPredicted RBP16.84■□□□□ 0.29
PKP4-205ENST00000426248 NAB2Q15742 525 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 SEZ6Q53EL9 994 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 HYIQ5T013 277 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 FBXO25Q8TCJ0 367 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 ZFAND2BQ8WV99 257 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 TTC1Q99614 292 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 AGPAT3Q9NRZ7 376 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 H0YGN5 161 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 C6orf163Q5TEZ5 329 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 MEI1Q5TIA1 1274 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 SPATA24Q86W54 205 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 AGGF1Q8N302 714 aaeCLIP16.84■□□□□ 0.29
PKP4-205ENST00000426248 RNF169Q8NCN4 708 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
PKP4-205ENST00000426248 TARS2Q9BW92 718 aaKnown RBP16.84■□□□□ 0.29
PKP4-205ENST00000426248 ERAP1Q9NZ08 941 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 NFS1Q9Y697 457 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 ATP2A1O14983 1001 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 AKAP3O75969 853 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 STAT1P42224 750 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 LAMC2Q13753 1193 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 EMC10Q5UCC4 262 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 CAPN12Q6ZSI9 719 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 ADAM33Q9BZ11 813 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 OCEL1Q9H607 264 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 HSPBP1Q9NZL4 362 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 DCTN4Q9UJW0 460 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 RGPD3A6NKT7 1758 aaPredicted RBP16.84■□□□□ 0.29
PKP4-205ENST00000426248 RGPD4Q7Z3J3 1758 aa16.84■□□□□ 0.29
PKP4-205ENST00000426248 MAPK13O15264 365 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 TMCC1O94876 653 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 ATP5DP30049 168 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 TFAMQ00059 246 aaKnown RBP16.83■□□□□ 0.29
PKP4-205ENST00000426248 SP2Q02086 613 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 MPP3Q13368 585 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 LBRQ14739 615 aaKnown RBP16.83■□□□□ 0.29
PKP4-205ENST00000426248 EFCAB12Q6NXP0 572 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 ST13P4Q8IZP2 240 aaPredicted RBP16.83■□□□□ 0.29
PKP4-205ENST00000426248 REPS2Q8NFH8 660 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 PABPC3Q9H361 631 aaKnown RBP16.83■□□□□ 0.29
PKP4-205ENST00000426248 LNPEPQ9UIQ6 1025 aa16.83■□□□□ 0.29
PKP4-205ENST00000426248 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 LTBP1Q14766 1721 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 DHX15O43143 795 aaKnown RBP16.83■□□□□ 0.28
PKP4-205ENST00000426248 TRPA1O75762 1119 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 MYBPC3Q14896 1274 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 EDRF1Q3B7T1 1238 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 APLFQ8IW19 511 aaPredicted RBP16.83■□□□□ 0.28
PKP4-205ENST00000426248 ZWILCHQ9H900 591 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 ZNF862O60290 1169 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 GFPT2O94808 682 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 TPBGLP0DKB5 382 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 MAP7D1Q3KQU3 841 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 FAM13CQ8NE31 585 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 PRPF31Q8WWY3 499 aaKnown RBP16.83■□□□□ 0.28
PKP4-205ENST00000426248 CRYGNQ8WXF5 182 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 MYLK2Q9H1R3 596 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 ARHGEF3Q9NR81 526 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 ASIC3Q9UHC3 531 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 TELO2Q9Y4R8 837 aa16.83■□□□□ 0.28
PKP4-205ENST00000426248 POLR2AP24928 1970 aaKnown RBP16.83■□□□□ 0.28
PKP4-205ENST00000426248 UNC5CO95185 931 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 SLC9A1P19634 815 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 TNFAIP3P21580 790 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 MUTP22033 750 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 C1QTNF12Q5T7M4 302 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 CROCCP2Q86T23 111 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 RBM12BQ8IXT5 1001 aaKnown RBP16.82■□□□□ 0.28
PKP4-205ENST00000426248 ARHGAP18Q8N392 663 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 UBE2TQ9NPD8 197 aaPredicted RBP16.82■□□□□ 0.28
PKP4-205ENST00000426248 WDR91A4D1P6 747 aa16.82■□□□□ 0.28
PKP4-205ENST00000426248 ZBTB48P10074 688 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms