RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MAP7Q14244 749 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 R3HDM1Q15032 1099 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 ATP13A4Q4VNC1 1196 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 RNF111Q6ZNA4 994 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 KCTD1Q719H9 257 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 RHOT2Q8IXI1 618 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 POU5F2Q8N7G0 328 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 SMYD1Q8NB12 490 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 SMC1BQ8NDV3 1235 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 PIP4K2CQ8TBX8 421 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 SYT11Q9BT88 431 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 TRAIPQ9BWF2 469 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 CYP4F11Q9HBI6 524 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 DDX43Q9NXZ2 648 aaKnown RBP11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 ZNF212Q9UDV6 495 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 TRAF3IP3Q9Y228 551 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 NHSQ6T4R5 1651 aa11.9□□□□□ -0.5
SEC61A1-202ENST00000424880 SULT2A1Q06520 285 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 SF3B3Q15393 1217 aaKnown RBP11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 SPDYAQ5MJ70 313 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 NOP9Q86U38 636 aaKnown RBP11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 SCUBE1Q8IWY4 988 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 IRGQQ8WZA9 623 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 SPZ1Q9BXG8 430 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 MIS12Q9H081 205 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 KCNK13Q9HB14 408 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 PPARGC1AQ9UBK2 798 aaKnown RBP11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 ZMYM2Q9UBW7 1377 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 ANAPC7Q9UJX3 599 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 DOLKQ9UPQ8 538 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 NEU2Q9Y3R4 380 aa11.9□□□□□ -0.51
SEC61A1-202ENST00000424880 TFPTP0C1Z6 253 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 ATXN3P54252 364 aaPredicted RBP11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 ADARP55265 1226 aaKnown RBP11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 IGBP1P78318 339 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 SLC25A3Q00325 362 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 MED21Q13503 144 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 RASA2Q15283 850 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 SH3D19Q5HYK7 790 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 IYDQ6PHW0 289 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 ZBTB46Q86UZ6 589 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 PPM1KQ8N3J5 372 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 TRIM55Q9BYV6 548 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 LRRC19Q9H756 370 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 MANSC1Q9H8J5 431 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 CYLDQ9NQC7 956 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 ATP8B3O60423 1300 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 CCR3P51677 355 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 HPCAP84074 193 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 MYL7Q01449 175 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 ASPHQ12797 758 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 MMEL1Q495T6 779 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 DHX38Q92620 1227 aaKnown RBP11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 CCDC97Q96F63 343 aaPredicted RBP11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 FAM111AQ96PZ2 611 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 TSSK1BQ9BXA7 367 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 ARHGEF4Q9NR80 690 aa11.89□□□□□ -0.51
SEC61A1-202ENST00000424880 MAGEB2O15479 319 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 PCP11498 1178 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 PHEXP78562 749 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 UBAP2LQ14157 1087 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 GRAMD1BQ3KR37 738 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 LRRC8BQ6P9F7 803 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 FBXL19Q6PCT2 694 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 LRRC43Q8N309 656 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 RIN3Q8TB24 985 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 CD101Q93033 1021 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 EURLQ9NYK6 297 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 LGALS13Q9UHV8 139 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 ADAMTS6Q9UKP5 1117 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 MINPP1Q9UNW1 487 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 A0A1B0GTW7 788 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 H0YIN7 160 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 PDXKO00764 312 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 TBCAO75347 108 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 RARBP10826 455 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 EEF2P13639 858 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 NELFEP18615 380 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 MUTP22033 750 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 PSMD7P51665 324 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 TFDP1Q14186 410 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 STAT4Q14765 748 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 CYP1B1Q16678 543 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 RALGPS1Q5JS13 557 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 SLC10A5Q5PT55 438 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 NLRX1Q86UT6 975 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 ULK2Q8IYT8 1036 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 ZBTB8BQ8NAP8 495 aaPredicted RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 OR6Y1Q8NGX8 325 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 MTBPQ96DY7 904 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 SIKE1Q9BRV8 207 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 TYW1Q9NV66 732 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 SAE1Q9UBE0 346 aaPredicted RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 DNM3Q9UQ16 869 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 TYROBPO43914 113 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 TRPA1O75762 1119 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 ZNF24P17028 368 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms