RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 ST13P5Q8NFI4 369 aaPredicted RBP22.08■■□□□ 1.13
PTPRU-203ENST00000415600 R3HCC1Q9Y3T6 440 aaKnown RBP22.08■■□□□ 1.13
PTPRU-203ENST00000415600 TULP1O00294 542 aaPredicted RBP22.08■■□□□ 1.12
PTPRU-203ENST00000415600 KIAA0391O15091 583 aaKnown RBP22.08■■□□□ 1.12
PTPRU-203ENST00000415600 MYL4P12829 197 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 DUSP4Q13115 394 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 PDILTQ8N807 584 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 PJA1Q8NG27 643 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 E2F7Q96AV8 911 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 PGLYRP2Q96PD5 576 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 NELL2Q99435 816 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 STRA6Q9BX79 667 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 SLITRK6Q9H5Y7 841 aa22.08■■□□□ 1.12
PTPRU-203ENST00000415600 MRPS17Q9Y2R5 130 aaKnown RBP22.08■■□□□ 1.12
PTPRU-203ENST00000415600 ZFHX2Q9C0A1 2572 aaPredicted RBP22.07■■□□□ 1.12
PTPRU-203ENST00000415600 KANSL1LA0AUZ9 987 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 FRMD3A2A2Y4 597 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 CYB561D2O14569 222 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 NCAM2O15394 837 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 CYP11A1P05108 521 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 MAGEA9P43362 315 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 SYKP43405 635 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 TUFMP49411 452 aaKnown RBP22.07■■□□□ 1.12
PTPRU-203ENST00000415600 EPHA5P54756 1037 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 SASS6Q6UVJ0 657 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 IQUBQ8NA54 791 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 RNF214Q8ND24 703 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 DNASE1L2Q92874 299 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 SMARCD2Q92925 531 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 NKD2Q969F2 451 aaPredicted RBP22.07■■□□□ 1.12
PTPRU-203ENST00000415600 PYM1Q9BRP8 204 aaKnown RBP22.07■■□□□ 1.12
PTPRU-203ENST00000415600 FAM213AQ9BRX8 229 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 BCO2Q9BYV7 579 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 OSBPL6Q9BZF3 934 aa22.07■■□□□ 1.12
PTPRU-203ENST00000415600 TISP43B9A030 160 aa22.06■■□□□ 1.12
PTPRU-203ENST00000415600 ADSSP30520 456 aa22.06■■□□□ 1.12
PTPRU-203ENST00000415600 TFAMQ00059 246 aaKnown RBP22.06■■□□□ 1.12
PTPRU-203ENST00000415600 VEPH1Q14D04 833 aa22.06■■□□□ 1.12
PTPRU-203ENST00000415600 C2orf15Q8WU43 125 aaKnown RBP22.06■■□□□ 1.12
PTPRU-203ENST00000415600 ANP32BQ92688 251 aaKnown RBP22.06■■□□□ 1.12
PTPRU-203ENST00000415600 BRD9Q9H8M2 597 aa22.06■■□□□ 1.12
PTPRU-203ENST00000415600 FAM13BQ9NYF5 915 aa22.06■■□□□ 1.12
PTPRU-203ENST00000415600 CEP72Q9P209 647 aa22.06■■□□□ 1.12
PTPRU-203ENST00000415600 PPEF2O14830 753 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 FAM78AQ5JUQ0 283 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 CENPPQ6IPU0 288 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 ZC3H14Q6PJT7 736 aaKnown RBP22.05■■□□□ 1.12
PTPRU-203ENST00000415600 BRSK2Q8IWQ3 736 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 DEPDC1BQ8WUY9 529 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 IRF7Q92985 503 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 TCEAL4Q96EI5 215 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 ASB16Q96NS5 453 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 TRMT61BQ9BVS5 477 aaKnown RBP22.05■■□□□ 1.12
PTPRU-203ENST00000415600 MAGEF1Q9HAY2 307 aa22.05■■□□□ 1.12
PTPRU-203ENST00000415600 RBAKQ9NYW8 714 aaPredicted RBP22.05■■□□□ 1.12
PTPRU-203ENST00000415600 NOTCH4Q99466 2003 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 MTMR11A4FU01 709 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 EXTL3O43909 919 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 OR4Q2P0C623 313 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 TAF12Q16514 161 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 TANGO2Q6ICL3 276 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 ZNF852Q6ZMS4 543 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 DCP1BQ8IZD4 617 aaKnown RBP22.04■■□□□ 1.12
PTPRU-203ENST00000415600 FAM200AQ8TCP9 573 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 GCNAQ96QF7 691 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 SEMA4AQ9H3S1 761 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 KPNA7A9QM74 516 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 SPTLC1O15269 473 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 DCNP07585 359 aaKnown RBP22.04■■□□□ 1.12
PTPRU-203ENST00000415600 UBXN2BQ14CS0 331 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 SURF1Q15526 300 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 ARHGAP15Q53QZ3 475 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 CRELD2Q6UXH1 353 aaPredicted RBP22.04■■□□□ 1.12
PTPRU-203ENST00000415600 HS6ST3Q8IZP7 471 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 NOC3LQ8WTT2 800 aaKnown RBP22.04■■□□□ 1.12
PTPRU-203ENST00000415600 DDX23Q9BUQ8 820 aaKnown RBP22.04■■□□□ 1.12
PTPRU-203ENST00000415600 FOXQ1Q9C009 403 aa22.04■■□□□ 1.12
PTPRU-203ENST00000415600 MAN2B1O00754 1011 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 PSMC3P17980 439 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 TSPY1Q01534 308 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 KCNA1Q09470 495 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 CCDC173Q0VFZ6 552 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 SLC39A12Q504Y0 691 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 FRMD5Q7Z6J6 570 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 C1orf210Q8IVY1 113 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 ELOA2Q8IYF1 753 aaPredicted RBP22.03■■□□□ 1.12
PTPRU-203ENST00000415600 TMEM130Q8N3G9 435 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 ATAD1Q8NBU5 361 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 ZSCAN18Q8TBC5 510 aaPredicted RBP22.03■■□□□ 1.12
PTPRU-203ENST00000415600 SAAL1Q96ER3 474 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 ZCWPW1Q9H0M4 648 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 TRPV4Q9HBA0 871 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 KBTBD4Q9NVX7 518 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 ITGA11Q9UKX5 1188 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 SLC27A5Q9Y2P5 690 aa22.03■■□□□ 1.12
PTPRU-203ENST00000415600 PTPRZ1P23471 2315 aaPredicted RBP22.02■■□□□ 1.12
PTPRU-203ENST00000415600 A0A087X0B3 334 aa22.02■■□□□ 1.12
PTPRU-203ENST00000415600 HUS1O60921 280 aa22.02■■□□□ 1.12
PTPRU-203ENST00000415600 CAVIN2O95810 425 aa22.02■■□□□ 1.12
PTPRU-203ENST00000415600 CCR2P41597 374 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms