RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CDKL5O76039 1030 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 SUN1O94901 812 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZFPL1O95159 310 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 KITP10721 976 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 PEX2P28328 305 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 SLC7A1P30825 629 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 KCNJ5P48544 419 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 ANXA11P50995 505 aaKnown RBP4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 VAV2P52735 878 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 TIGD2Q4W5G0 525 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 DBX2Q6ZNG2 339 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 CLNKQ7Z7G1 428 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 PJA1Q8NG27 643 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 FBXO41Q8TF61 875 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 NACC2Q96BF6 587 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 P2RX7Q99572 595 aaKnown RBP4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 SPATA5L1Q9BVQ7 753 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 ALOXE3Q9BYJ1 711 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 LRRC27Q9C0I9 530 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 HESX1Q9UBX0 185 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 MAP3K2Q9Y2U5 619 aa4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 MTO1Q9Y2Z2 717 aaKnown RBP4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P11-201ENST00000413899 SPATA31A3Q5VYP0 1347 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 A0A087WWL8 130 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 ANO9A1A5B4 782 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 BTN3A1O00481 513 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 UNC5CO95185 931 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 KIF20AO95235 890 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 FOSP01100 380 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 KRT18P05783 430 aaKnown RBP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 MYL1P05976 194 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 MAKP20794 623 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 TOB1P50616 345 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 RPS7P62081 194 aaKnown RBP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 GUCY1B3Q02153 619 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 SCAPQ12770 1279 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 DYRK1AQ13627 763 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 HLXQ14774 488 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 CNGA2Q16280 664 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 AMOTQ4VCS5 1084 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 PPP4R4Q6NUP7 873 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZNF783Q6ZMS7 281 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 C11orf96Q7Z7L8 435 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 COLGALT2Q8IYK4 626 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 OR6B3Q8NGW1 331 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 NMD3Q96D46 503 aaKnown RBP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 RNF31Q96EP0 1072 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 MSLNLQ96KJ4 702 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 HEPHQ9BQS7 1158 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZNF341Q9BYN7 854 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 NUP62CLQ9H1M0 184 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 SMURF2Q9HAU4 748 aa4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 MRPS18AQ9NVS2 196 aaKnown RBP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB1P11-201ENST00000413899 USP19O94966 1318 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 M0QYG6 137 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 ZNF202O95125 648 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 SPDEFO95238 335 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 GRPP07492 148 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 TACR2P21452 398 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 VIPR2P41587 438 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 SLC11A2P49281 568 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 SUMO3P55854 103 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 WNT3P56703 355 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 BLOC1S1P78537 153 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 FMO1Q01740 532 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 PUM1Q14671 1186 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 SAFBQ15424 915 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 GEN1Q17RS7 908 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 COBLL1Q53SF7 1204 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 LY6G5CQ5SRR4 150 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 ABHD17BQ5VST6 288 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 LMBRD2Q68DH5 695 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 TAF2Q6P1X5 1199 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 KCNV1Q6PIU1 500 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 NOL8Q76FK4 1167 aaKnown RBP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 GGNQ86UU5 652 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 ADGRG5Q8IZF4 528 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 PSD4Q8NDX1 1056 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 PROKR1Q8TCW9 393 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 MAML1Q92585 1016 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 MOGAT1Q96PD6 335 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 MLST8Q9BVC4 326 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 UNKLQ9H9P5 680 aaKnown RBP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 KIAA1586Q9HCI6 787 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 STK32BQ9NY57 414 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 SRRDQ9UH36 339 aa4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 AFF4Q9UHB7 1163 aaKnown RBP4.74□□□□□ -1.65
HMGB1P11-201ENST00000413899 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 PIPSLA2A3N6 862 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 TRIM43BA6NCK2 446 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 NPIPB8E9PQR5 432 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 FOXN3O00409 490 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 APAF1O14727 1248 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 LPXNO60711 386 aa4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 EGR2P11161 476 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P11-201ENST00000413899 CYP2C9P11712 490 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms