RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-210ENST00000409954 KIAA0391O15091 583 aaKnown RBP15.67■□□□□ 0.1
MCF2L-210ENST00000409954 CHADO15335 359 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 GJA1P17302 382 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 TARSP26639 723 aaKnown RBP15.67■□□□□ 0.1
MCF2L-210ENST00000409954 WEE1P30291 646 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 VIPR2P41587 438 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 NASPP49321 788 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-210ENST00000409954 FOXK2Q01167 660 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 AMPD3Q01432 767 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 FZD5Q13467 585 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 GRM2Q14416 872 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 VEPH1Q14D04 833 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 TAF12Q16514 161 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 ARHGAP15Q53QZ3 475 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 STXBP4Q6ZWJ1 553 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 TMC8Q8IU68 726 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 MAML2Q8IZL2 1156 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-210ENST00000409954 SPPL2BQ8TCT7 592 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 MSANTD3Q96H12 275 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 ZNF396Q96N95 335 aaPredicted RBP15.67■□□□□ 0.1
MCF2L-210ENST00000409954 FAM213AQ9BRX8 229 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 IER2Q9BTL4 223 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 CRISPLD1Q9H336 500 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 ATXN3LQ9H3M9 355 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 OBP2AQ9NY56 170 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 TBC1D7Q9P0N9 293 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 NOTCH4Q99466 2003 aa15.67■□□□□ 0.1
MCF2L-210ENST00000409954 A0A1W2PRU2 124 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 FRMD3A2A2Y4 597 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 DPYSL4O14531 572 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 KINO60870 393 aaKnown RBP15.66■□□□□ 0.1
MCF2L-210ENST00000409954 CSTF1Q05048 431 aaKnown RBP15.66■□□□□ 0.1
MCF2L-210ENST00000409954 KCNA1Q09470 495 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 PPP2R5DQ14738 602 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 STK38Q15208 465 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 SLC39A12Q504Y0 691 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 WSCD1Q658N2 575 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 ARID3BQ8IVW6 561 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-210ENST00000409954 LINC00301Q8NCQ3 95 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 OR10T2Q8NGX3 314 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 FAM200AQ8TCP9 573 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 CSGALNACT1Q8TDX6 532 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 ATRIPQ8WXE1 791 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 FAM3CQ92520 227 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 ZNF560Q96MR9 790 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 TMEM209Q96SK2 561 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 FAM126AQ9BYI3 521 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-210ENST00000409954 CUEDC2Q9H467 287 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 C8orf33Q9H7E9 229 aaPredicted RBP15.66■□□□□ 0.1
MCF2L-210ENST00000409954 PCDHGA2Q9Y5H1 932 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 MYH11P35749 1972 aa15.66■□□□□ 0.1
MCF2L-210ENST00000409954 SOBPA7XYQ1 873 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 SPTLC2O15270 562 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 EXTL3O43909 919 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 PPP6R2O75170 966 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 GABRR2P28476 465 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 CDC25CP30307 473 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 TFAMQ00059 246 aaKnown RBP15.65■□□□□ 0.1
MCF2L-210ENST00000409954 FCHO2Q0JRZ9 810 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 SURF1Q15526 300 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 NFE2Q16621 373 aaPredicted RBP15.65■□□□□ 0.1
MCF2L-210ENST00000409954 MGAT5BQ3V5L5 792 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 GAREM2Q75VX8 874 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 BRSK2Q8IWQ3 736 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 EFCAB13Q8IY85 973 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 LRRC52Q8N7C0 313 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 SPATA18Q8TC71 538 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 TNMDQ9H2S6 317 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 TASP1Q9H6P5 420 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 LMAN1LQ9HAT1 526 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 AGAP1Q9UPQ3 857 aa15.65■□□□□ 0.1
MCF2L-210ENST00000409954 R3HCC1Q9Y3T6 440 aaKnown RBP15.65■□□□□ 0.1
MCF2L-210ENST00000409954 SHISA7A6NL88 538 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 NRG2O14511 850 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-210ENST00000409954 HUS1O60921 280 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 HAPLN1P10915 354 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-210ENST00000409954 NRLP54845 237 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 RBP5P82980 135 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 TSPY1Q01534 308 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 ARHGAP29Q52LW3 1261 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 DPH6Q7L8W6 267 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 LRRTM3Q86VH5 581 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 ZNF687Q8N1G0 1237 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 TMEM86AQ8N2M4 240 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 CSGALNACT2Q8N6G5 542 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 PDILTQ8N807 584 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 ZBTB44Q8NCP5 570 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 RUBCNQ92622 972 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 GCNAQ96QF7 691 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 SEPT5Q99719 369 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-210ENST00000409954 ACBD6Q9BR61 282 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 IKZF4Q9H2S9 585 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 KIAA1586Q9HCI6 787 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 THG1LQ9NWX6 298 aaKnown RBP15.64■□□□□ 0.09
MCF2L-210ENST00000409954 ZSCAN32Q9NX65 697 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 GDAP2Q9NXN4 497 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 RBAKQ9NYW8 714 aaPredicted RBP15.64■□□□□ 0.09
MCF2L-210ENST00000409954 ITGA11Q9UKX5 1188 aa15.64■□□□□ 0.09
MCF2L-210ENST00000409954 NDRG2Q9UN36 371 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms