RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TSPY1Q01534 308 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PLD1Q13393 1074 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 NCOA4Q13772 614 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 ZNF699Q32M78 642 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 ZACNQ401N2 412 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 TDRD10Q5VZ19 366 aaKnown RBP11.71□□□□□ -0.53
CHMP3-205ENST00000409810 ADHFE1Q8IWW8 467 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 ADGRF2Q8IZF7 708 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PDCL2Q8N4E4 241 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 C12orf76Q8N812 135 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-205ENST00000409810 CCDC150Q8NCX0 1101 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 SLC7A14Q8TBB6 771 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PLEKHO2Q8TD55 490 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 SMG7Q92540 1137 aaKnown RBP11.71□□□□□ -0.53
CHMP3-205ENST00000409810 ZNF516Q92618 1163 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 FAM84AQ96KN4 292 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 CEP63Q96MT8 703 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 MMS19Q96T76 1030 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PHF7Q9BWX1 381 aaPredicted RBP11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PRKD2Q9BZL6 878 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 IMPG2Q9BZV3 1241 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.53
CHMP3-205ENST00000409810 L1RE1Q9UN81 338 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 NR2E1Q9Y466 385 aa11.71□□□□□ -0.53
CHMP3-205ENST00000409810 PPP1R3GB7ZBB8 358 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 GNA14O95837 355 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 C4BPAP04003 597 aaKnown RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 CD44P16070 742 aaKnown RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 BMP6P22004 513 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 PCSK1P29120 753 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 SSTR3P32745 418 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 PIK3CAP42336 1068 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 PMS1P54277 932 aaKnown RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 DLG4P78352 724 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 ADCY1Q08828 1119 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 GPR17Q13304 367 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 WDR72Q3MJ13 1102 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 DCAF17Q5H9S7 520 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 ZNF667Q5HYK9 610 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 FILIP1Q7Z7B0 1213 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 TCEAL8Q8IYN2 117 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 DCP1BQ8IZD4 617 aaKnown RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 ELMOD1Q8N336 334 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 MLKLQ8NB16 471 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 C2orf15Q8WU43 125 aaKnown RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 TAF4BQ92750 862 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 ZCWPW1Q9H0M4 648 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 GZF1Q9H116 711 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 MMRN2Q9H8L6 949 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 VRTNQ9H8Y1 702 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 CYP4F11Q9HBI6 524 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 TMEM8AQ9HCN3 771 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 DDX43Q9NXZ2 648 aaKnown RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 HSFX1Q9UBD0 423 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 ARMCX3Q9UH62 379 aaPredicted RBP11.7□□□□□ -0.54
CHMP3-205ENST00000409810 DOCK8Q8NF50 2099 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 MYH10P35580 1976 aa11.7□□□□□ -0.54
CHMP3-205ENST00000409810 CLUHO75153 1309 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 CST3P01034 146 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-205ENST00000409810 FAM163BP0C2L3 166 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 OR4Q2P0C623 313 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 TRIM49P0CI25 452 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 TRIM49CP0CI26 452 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 MXI1P50539 228 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 MYL6P60660 151 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 ZP2Q05996 745 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 NFE2Q16621 373 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-205ENST00000409810 SGSM1Q2NKQ1 1148 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 TCERG1LQ5VWI1 586 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 KRT39Q6A163 491 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 TTI2Q6NXR4 508 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 RNF19BQ6ZMZ0 732 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 SV2AQ7L0J3 742 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 FRMD5Q7Z6J6 570 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 GJD3Q8N144 294 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 OR10T2Q8NGX3 314 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 GPT2Q8TD30 523 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 EEF2KMTQ96G04 330 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 ACBD6Q9BR61 282 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 COL25A1Q9BXS0 654 aaPredicted RBP11.69□□□□□ -0.54
CHMP3-205ENST00000409810 POMKQ9H5K3 350 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 WDR6Q9NNW5 1121 aaKnown RBP11.69□□□□□ -0.54
CHMP3-205ENST00000409810 RWDD2AQ9UIY3 292 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 POLIQ9UNA4 740 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 INSL5Q9Y5Q6 135 aa11.69□□□□□ -0.54
CHMP3-205ENST00000409810 PTPRDP23468 1912 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 MYO10Q9HD67 2058 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 MTMR11A4FU01 709 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 GABRDO14764 452 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 CCL16O15467 120 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 N4BP1O75113 896 aaKnown RBP11.68□□□□□ -0.54
CHMP3-205ENST00000409810 TACC1O75410 805 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 HLA-DRAP01903 254 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 WEE2P0C1S8 567 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 TRIM21P19474 475 aaKnown RBP11.68□□□□□ -0.54
CHMP3-205ENST00000409810 PTMSP20962 102 aa11.68□□□□□ -0.54
CHMP3-205ENST00000409810 WARSP23381 471 aaKnown RBP11.68□□□□□ -0.54
CHMP3-205ENST00000409810 GCLMP48507 274 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms