RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 PRKG1Q13976 671 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 MYBPC3Q14896 1274 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 MLANAQ16655 118 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 PRR16Q569H4 304 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 RNF220Q5VTB9 566 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 CDC42EP5Q6NZY7 148 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 NPNTQ6UXI9 565 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 SPATA5Q8NB90 893 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 OR14C36Q8NHC7 312 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 FATE1Q969F0 183 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 PAWRQ96IZ0 340 aaKnown RBP7.16□□□□□ -1.26
LSM5-203ENST00000409782 NEUROD6Q96NK8 337 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 LRFN3Q9BTN0 628 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 ACE2Q9BYF1 805 aaPredicted RBP7.16□□□□□ -1.26
LSM5-203ENST00000409782 TMEM39BQ9GZU3 492 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 SLC6A17Q9H1V8 727 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 ZBTB40Q9NUA8 1239 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 HMG20BQ9P0W2 317 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 BTBD7Q9P203 1132 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 ABCF2Q9UG63 623 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 DPP7Q9UHL4 492 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 PNMA2Q9UL42 364 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 YBX2Q9Y2T7 364 aaKnown RBP7.16□□□□□ -1.26
LSM5-203ENST00000409782 CDY2AQ9Y6F7 541 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 AKAP11Q9UKA4 1901 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 MROH7-TTC4A0A0A0MT08 1334 aa7.16□□□□□ -1.26
LSM5-203ENST00000409782 COL2A1P02458 1487 aaPredicted RBP7.16□□□□□ -1.26
LSM5-203ENST00000409782 DOCK2Q92608 1830 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 MYH2Q9UKX2 1941 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 MANSC4A6NHS7 340 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 NOTOA8MTQ0 251 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 ACOT7O00154 380 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 MAFGO15525 162 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 HTRA2O43464 458 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 MAFO75444 373 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 EDNRBP24530 442 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 PEX2P28328 305 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 MCAMP43121 646 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 FXR1P51114 621 aaKnown RBP eCLIP7.15□□□□□ -1.26
LSM5-203ENST00000409782 GSTO1P78417 241 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 ADCY2Q08462 1091 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 POLD3Q15054 466 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 LLGL1Q15334 1064 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 ALFQ53S48 1182 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 CCDC158Q5M9N0 1113 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 TTC39AQ5SRH9 613 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 GJC2Q5T442 439 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 KLHDC10Q6PID8 442 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 NLRX1Q86UT6 975 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 MYLK4Q86YV6 388 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 RPAP2Q8IXW5 612 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 VPS37AQ8NEZ2 397 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.15□□□□□ -1.262e-7■□□□□ 9.7
LSM5-203ENST00000409782 FAM151AQ8WW52 585 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 CLEC4DQ8WXI8 215 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 LRTOMTQ8WZ04 291 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 SLC2A13Q96QE2 648 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 TUBGCP5Q96RT8 1024 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 IDI2Q9BXS1 227 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 KRTAP4-8Q9BYQ9 185 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 PITHD1Q9GZP4 211 aaPredicted RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 KMT5AQ9NQR1 393 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 RNF186Q9NXI6 227 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 PRSS50Q9UI38 385 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 DBNLQ9UJU6 430 aaKnown RBP7.15□□□□□ -1.26
LSM5-203ENST00000409782 PADI4Q9UM07 663 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 GTF2A1LQ9UNN4 478 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 LZTS1Q9Y250 596 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 POLHQ9Y253 713 aa7.15□□□□□ -1.26
LSM5-203ENST00000409782 GPR75-ASB3A0A0A6YYF3 556 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.14□□□□□ -1.27
LSM5-203ENST00000409782 MGEA5O60502 916 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 ENTPD3O75355 529 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 ALDH2P05091 517 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 LPLP06858 475 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 LDHCP07864 332 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 COL6A1P12109 1028 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 FAHP16930 419 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 ARL4AP40617 200 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 BTDP43251 543 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 LGALS4P56470 323 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 INHBEP58166 350 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 MECOMQ03112 1051 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 VGLL4Q14135 290 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 TRIM25Q14258 630 aaKnown RBP7.14□□□□□ -1.27
LSM5-203ENST00000409782 ADRM1Q16186 407 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 THEMIS2Q5TEJ8 643 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 ATRNL1Q5VV63 1379 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 SLFN12LQ6IEE8 588 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 OR2C3Q8N628 320 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 CLMNQ96JQ2 1002 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 ZNF341Q9BYN7 854 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 USP40Q9NVE5 1235 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.14□□□□□ -1.27
LSM5-203ENST00000409782 SCOCQ9UIL1 159 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 FZD1Q9UP38 647 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 EXOC6BQ9Y2D4 811 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 STXBP5LQ9Y2K9 1186 aa7.14□□□□□ -1.27
LSM5-203ENST00000409782 MYPNQ86TC9 1320 aa7.13□□□□□ -1.27
LSM5-203ENST00000409782 CCDC154A6NI56 674 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms