RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 C1orf131Q8NDD1 294 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 ZNF333Q96JL9 665 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 TUBB2BQ9BVA1 445 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 NUP85Q9BW27 656 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CRISPLD2Q9H0B8 497 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 FAM124BQ9H5Z6 455 aaPredicted RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 RSAD1Q9HA92 442 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 SLC38A7Q9NVC3 462 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 CNOT8Q9UFF9 292 aaKnown RBP14.97□□□□□ -0.01
GPNMB-203ENST00000409458 NME7Q9Y5B8 376 aa14.97□□□□□ -0.01
GPNMB-203ENST00000409458 TDRD15B5MCY1 1934 aaKnown RBP14.96□□□□□ -0.01
GPNMB-203ENST00000409458 KPNA7A9QM74 516 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 MTA2O94776 668 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 LSM8O95777 96 aaKnown RBP14.96□□□□□ -0.01
GPNMB-203ENST00000409458 THP07101 528 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 ATN1P54259 1190 aaPredicted RBP14.96□□□□□ -0.01
GPNMB-203ENST00000409458 PTP4A2Q12974 167 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 BFSP2Q13515 415 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 WHAMMP3Q1A5X7 153 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 SOWAHAQ2M3V2 549 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 C2CD6Q53TS8 623 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 DENND1BQ6P3S1 775 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 DAAM2Q86T65 1068 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 ZNF598Q86UK7 904 aaKnown RBP14.96□□□□□ -0.01
GPNMB-203ENST00000409458 RTN4RL1Q86UN2 441 aaPredicted RBP14.96□□□□□ -0.01
GPNMB-203ENST00000409458 PHF13Q86YI8 300 aaPredicted RBP14.96□□□□□ -0.01
GPNMB-203ENST00000409458 TTC39CQ8N584 583 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 MNS1Q8NEH6 495 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 TSC1Q92574 1164 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 OSBPL9Q96SU4 736 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 PSMB7Q99436 277 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 C11orf70Q9BRQ4 267 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 RGS18Q9NS28 235 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 GDAP2Q9NXN4 497 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 HYOU1Q9Y4L1 999 aa14.96□□□□□ -0.01
GPNMB-203ENST00000409458 ZNF185O15231 689 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 MED7O43513 233 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 NBNO60934 754 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 SKIP12755 728 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 RRM1P23921 792 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 IGFBP6P24592 240 aaPredicted RBP14.95□□□□□ -0.02
GPNMB-203ENST00000409458 CDH5P33151 784 aaPredicted RBP14.95□□□□□ -0.02
GPNMB-203ENST00000409458 DNA2P51530 1060 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 GPNMBQ14956 572 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 SV2CQ496J9 727 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 LLGL2Q6P1M3 1020 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 MMS22LQ6ZRQ5 1243 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 WDTC1Q8N5D0 677 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 ZNF564Q8TBZ8 553 aaPredicted RBP14.95□□□□□ -0.02
GPNMB-203ENST00000409458 KBTBD7Q8WVZ9 684 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 PGBD4Q96DM1 585 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 TRIM11Q96F44 468 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 STXBP5LQ9Y2K9 1186 aa14.95□□□□□ -0.02
GPNMB-203ENST00000409458 C9IYK1 514 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 TADA3O75528 432 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 MYBL1P10243 752 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 FGFR1P11362 822 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 VDRP11473 427 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 CXCR5P32302 372 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 LILRA4P59901 499 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 NAA30Q147X3 362 aaPredicted RBP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 FBXO46Q6PJ61 603 aaPredicted RBP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 PHLDB2Q86SQ0 1253 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 NT5DC3Q86UY8 548 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 SYCE1Q8N0S2 351 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 TMEM35BQ8NCS4 154 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 DIS3LQ8TF46 1054 aaKnown RBP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 COG1Q8WTW3 980 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 CAPZA3Q96KX2 299 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 NT5C1AQ9BXI3 368 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 TSPYL2Q9H2G4 693 aaPredicted RBP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 ABCB6Q9NP58 842 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 AVENQ9NQS1 362 aaPredicted RBP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 ADAM22Q9P0K1 906 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 UVRAGQ9P2Y5 699 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 L1RE1Q9UN81 338 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 V9GYY5 206 aaPredicted RBP14.94□□□□□ -0.02
GPNMB-203ENST00000409458 SCN5AQ14524 2016 aa14.94□□□□□ -0.02
GPNMB-203ENST00000409458 CASTOR2A6NHX0 329 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 O00370 1275 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 PITPNM1O00562 1244 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 PODXLO00592 558 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 HCRTO43612 131 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 MICAL2O94851 1124 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 POMCP01189 267 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 PRLRP16471 622 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 MMP8P22894 467 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 CLCNKBP51801 687 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 C1QBPQ07021 282 aaKnown RBP14.93□□□□□ -0.02
GPNMB-203ENST00000409458 C11orf63Q6NUN7 778 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 PPP1R2P3Q6NXS1 205 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 SLC39A5Q6ZMH5 540 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 PEX26Q7Z412 305 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 LIMS2Q7Z4I7 341 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 OR6B3Q8NGW1 331 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 BTBD6Q96KE9 485 aa14.93□□□□□ -0.02
GPNMB-203ENST00000409458 CALR3Q96L12 384 aaKnown RBP14.93□□□□□ -0.02
GPNMB-203ENST00000409458 HEXIM2Q96MH2 286 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms