RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PCSK1P29120 753 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 CDC25CP30307 473 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 POLR2BP30876 1174 aaKnown RBP9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 LHX1P48742 406 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 CASP5P51878 434 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 STARD6P59095 220 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 KCNA1Q09470 495 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 TCF15Q12870 199 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 DUSP4Q13115 394 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 BECN1Q14457 450 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 DUOXA2Q1HG44 320 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 SLC5A9Q2M3M2 681 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 MGAT5BQ3V5L5 792 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 SLC39A12Q504Y0 691 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 WDR49Q8IV35 697 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 YAF2Q8IY57 180 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 CSGALNACT2Q8N6G5 542 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 TOP6BLQ8N6T0 577 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 DTWD2Q8NBA8 298 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 ZNF507Q8TCN5 953 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 PSMG2Q969U7 264 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 MSANTD3Q96H12 275 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 SPATA32Q96LK8 384 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 ASB16Q96NS5 453 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 PGLYRP2Q96PD5 576 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 FNBP1Q96RU3 617 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 CBWD1Q9BRT8 395 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 BCO2Q9BYV7 579 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 SCAND2PQ9GZW5 306 aaPredicted RBP9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 ZCWPW1Q9H0M4 648 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 BRD9Q9H8M2 597 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 HSPBP1Q9NZL4 362 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 RCOR1Q9UKL0 485 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 PCDHA7Q9UN72 937 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 AGAP1Q9UPQ3 857 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 SIT1Q9Y3P8 196 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 PCDHB5Q9Y5E4 795 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 TCHHQ07283 1943 aa9.78□□□□□ -0.84
SNORD88A-201ENST00000408314 TSC2P49815 1807 aa9.77□□□□□ -0.84
SNORD88A-201ENST00000408314 KANSL1LA0AUZ9 987 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 KRBA1A5PL33 1030 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 GOLGA8IPA6NC78 632 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 GOLGA8JA6NMD2 632 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 MAN2B1O00754 1011 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 DPYSL4O14531 572 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 SPTLC1O15269 473 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 OR4Q2P0C623 313 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 NPR3P17342 541 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 PSMC3P17980 439 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 CMA1P23946 247 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 GPC5P78333 572 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 BFSP1Q12934 665 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 PSMD2Q13200 908 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 MAPRE1Q15691 268 aaKnown RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 SNRNP35Q16560 246 aaKnown RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 BMT2Q1RMZ1 405 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 FOXD4L6Q3SYB3 417 aaPredicted RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 WSCD1Q658N2 575 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 ZC3H14Q6PJT7 736 aaKnown RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 FOXD4L3Q6VB84 417 aaPredicted RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 EPM2AIP1Q7L775 607 aaPredicted RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 DPH6Q7L8W6 267 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 ALYREFQ86V81 257 aaKnown RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 C12orf56Q8IXR9 622 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 C1orf127Q8N9H9 656 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 XXYLT1Q8NBI6 393 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 PJA1Q8NG27 643 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 LEO1Q8WVC0 666 aaPredicted RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 BORCS6Q96GS4 357 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 SEPT5Q99719 369 aaPredicted RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 ACBD6Q9BR61 282 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 IER2Q9BTL4 223 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 TRMT61BQ9BVS5 477 aaKnown RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 SEMA4AQ9H3S1 761 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 PCIF1Q9H4Z3 704 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 TRPV4Q9HBA0 871 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 ABCB6Q9NP58 842 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 TRPV5Q9NQA5 729 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 EXOC1Q9NV70 894 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 INTS13Q9NVM9 706 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 GDAP2Q9NXN4 497 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 CEP72Q9P209 647 aa9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 UXTQ9UBK9 157 aaPredicted RBP9.77□□□□□ -0.85
SNORD88A-201ENST00000408314 SOBPA7XYQ1 873 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 H0Y858 1186 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 CSH1P0DML2 217 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 CSH2P0DML3 217 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 GLULP15104 373 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 TNNI1P19237 187 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 DDX6P26196 483 aaKnown RBP eCLIP9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 NBL1P41271 181 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 AP3M2P53677 418 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 RPL10AP62906 217 aaKnown RBP9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 DNM1Q05193 864 aaKnown RBP9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 SLC44A4Q53GD3 710 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 FAM78AQ5JUQ0 283 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 ZNF852Q6ZMS4 543 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 C4orf50Q6ZRC1 276 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 ADGRF2Q8IZF7 708 aa9.76□□□□□ -0.85
SNORD88A-201ENST00000408314 ATAD1Q8NBU5 361 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms