RNA–Protein interactions for RNA: ENST00000397358.7

HMBOX1-203, Transcript of homeobox containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMBOX1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-203ENST00000397358 PDGFDQ9GZP0 370 aaPredicted RBP13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 STAM2O75886 525 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 CST3P01034 146 aaPredicted RBP13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 RPA3P35244 121 aaPredicted RBP13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 TCEAL1Q15170 157 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 XKR3Q5GH77 459 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 ZNF677Q86XU0 584 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 WRNIP1Q96S55 665 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 NOP53Q9NZM5 478 aaKnown RBP13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 ZNF541Q9H0D2 1346 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 VNN1O95497 513 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 TAC1P20366 129 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 TNFSF9P41273 254 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 SESN3P58005 492 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 MYL6P60660 151 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 RNASELQ05823 741 aaKnown RBP13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 TAS1R3Q7RTX0 852 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 ECHDC2Q86YB7 292 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 RFX6Q8HWS3 928 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 C7orf43Q8WVR3 580 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 RXFP1Q9HBX9 757 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 NPHS2Q9NP85 383 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 MCM8Q9UJA3 840 aa13.85□□□□□ -0.19
HMBOX1-203ENST00000397358 H0YCG3 227 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 TP73O15350 636 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 C4BPAP04003 597 aaKnown RBP13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 KRT4P19013 534 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 WDR4P57081 412 aaKnown RBP13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 PSMD6Q15008 389 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 LVRNQ6Q4G3 990 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 EMC1Q8N766 993 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 TMEM35BQ8NCS4 154 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 MICAL1Q8TDZ2 1067 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 KIAA1683Q9H0B3 1180 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 MYLK2Q9H1R3 596 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 A0A0G2JND7 137 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 TMEM191BP0C7N4 346 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 DPEP1P16444 411 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 SPOCD1Q6ZMY3 1216 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 FAM83AQ86UY5 434 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 CTAGE3PQ8IX95 158 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 C17orf75Q9HAS0 396 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 STK32BQ9NY57 414 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 DNALI1O14645 258 aaPredicted RBP13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 LIASO43766 372 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 ZC3H11AO75152 810 aaKnown RBP eCLIP13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 SKAP2O75563 359 aaPredicted RBP13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 EN1Q05925 392 aaPredicted RBP13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 SLFN12LQ6IEE8 588 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 TRIM72Q6ZMU5 477 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 KATNAL2Q8IYT4 538 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 FBXL18Q96ME1 805 aa13.84□□□□□ -0.19
HMBOX1-203ENST00000397358 TBC1D12O60347 775 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 CST8O60676 142 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 TNFAIP1Q13829 316 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 EFTUD2Q15029 972 aaKnown RBP eCLIP13.83□□□□□ -0.23e-10■■■■□ 24
HMBOX1-203ENST00000397358 C3orf62Q6ZUJ4 267 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 GPRASP2Q96D09 838 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 CCDC134Q9H6E4 229 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 FOCADQ5VW36 1801 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 CYP1A1P04798 512 aaPredicted RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 ERFP50548 548 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 YWHAGP61981 247 aaKnown RBP eCLIP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 GAD2Q05329 585 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 TFDP1Q14186 410 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 HIF1AQ16665 826 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 ZC3H18Q86VM9 953 aaKnown RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 ZCCHC9Q8N567 271 aaKnown RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 SLITRK1Q96PX8 696 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 A1CFQ9NQ94 594 aaKnown RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 PMM2O15305 246 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 MAP3K6O95382 1288 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 CBX6O95503 412 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 GLRA2P23416 452 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 TBXAS1P24557 533 aaPredicted RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 GSCP56915 257 aaPredicted RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 BNIP1Q12981 228 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 MTFR1Q15390 333 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 FYB2Q5VWT5 728 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 LRRC71Q8N4P6 559 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 KCTD6Q8NC69 237 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 NTPCRQ9BSD7 190 aaKnown RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 MAK16Q9BXY0 300 aaKnown RBP13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 UBN1Q9NPG3 1134 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 UBR3Q6ZT12 1888 aa13.83□□□□□ -0.2
HMBOX1-203ENST00000397358 RAP1GAPP47736 663 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 CNTN2Q02246 1040 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 CDO1Q16878 200 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 CEP128Q6ZU80 1094 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 DEFB129Q9H1M3 183 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 TXLNGQ9NUQ3 528 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 INO80B-WBP1J3KQ70 363 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 LDHAP00338 332 aaKnown RBP13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 KCNA2P16389 499 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 CTCFP49711 727 aaPredicted RBP13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 NRLP54845 237 aa13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 PSMC1P62191 440 aaKnown RBP13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 MKRN3Q13064 507 aaKnown RBP13.82□□□□□ -0.2
HMBOX1-203ENST00000397358 SLC1A5Q15758 541 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms