RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PSMG1O95456 288 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 SLC18A1P54219 525 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 SP4Q02446 784 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 DGKZQ13574 1117 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 FYB2Q5VWT5 728 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 PPFIBP2Q8ND30 876 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 CFAP57Q96MR6 1250 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 GBP5Q96PP8 586 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 TIPINQ9BVW5 301 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 IDI2Q9BXS1 227 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 FHDC1Q9C0D6 1143 aaPredicted RBP25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 TMX4Q9H1E5 349 aaPredicted RBP25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 KCND2Q9NZV8 630 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 NEU2Q9Y3R4 380 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 WDR91A4D1P6 747 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 CFAP69A5D8W1 941 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 PYGLP06737 847 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 ABHD2P08910 425 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 TCF4P15884 667 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 SERPINB4P48594 390 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 CLEC16AQ2KHT3 1053 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 MXRA8Q9BRK3 442 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 C12orf65Q9H3J6 166 aaKnown RBP25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 ARL8BQ9NVJ2 186 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 RAB20Q9NX57 234 aa25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 TRPC5Q9UL62 973 aaPredicted RBP25.32■■□□□ 1.64
CSNK1E-203ENST00000396832 ATF7P17544 494 aaPredicted RBP25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 DYNC1I2Q13409 638 aaKnown RBP25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 XKR9Q5GH70 373 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 SV2AQ7L0J3 742 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 BBOF1Q8ND07 529 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 FBXL13Q8NEE6 735 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 VTI1AQ96AJ9 217 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 RBM41Q96IZ5 413 aaKnown RBP25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 GYG2O15488 501 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 EIF2AK2P19525 551 aaKnown RBP25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 AP1B1Q10567 949 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 CCDC89Q8N998 374 aa25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 DDX27Q96GQ7 796 aaKnown RBP25.31■■□□□ 1.64
CSNK1E-203ENST00000396832 QSER1Q2KHR3 1735 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 ZWINTO95229 277 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 P4HBP07237 508 aaKnown RBP25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 LVRNQ6Q4G3 990 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 SYNCQ9H7C4 482 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 A0A1W2PPM1 405 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 DENND3A2RUS2 1198 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 OVGP1Q12889 678 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 DACT2Q5SW24 774 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 MCOLN2Q8IZK6 566 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 RFWD2Q8NHY2 731 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 WDR60Q8WVS4 1066 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 STMN2Q93045 179 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 KANSL3Q9P2N6 904 aa25.3■■□□□ 1.64
CSNK1E-203ENST00000396832 SLX4Q8IY92 1834 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 MAP3K7O43318 606 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 MYCLP12524 364 aaPredicted RBP25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 GSTT1P30711 240 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 MAPK6Q16659 721 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 SCYL3Q8IZE3 742 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 MCUR1Q96AQ8 359 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 DDX50Q9BQ39 737 aaKnown RBP25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 FAM213AQ9BRX8 229 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 VPS37BQ9H9H4 285 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 PDP2Q9P2J9 529 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 TCEAL9Q9UHQ7 104 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 P4HA2O15460 535 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 PCNX4Q63HM2 1172 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 B3GNT9Q6UX72 402 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 VPS52Q8N1B4 723 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 PTPRN2Q92932 1015 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 PTCD3Q96EY7 689 aaKnown RBP25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 FAM192AQ9GZU8 254 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 C10orf88Q9H8K7 445 aa25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 STX18Q9P2W9 335 aaKnown RBP25.29■■□□□ 1.64
CSNK1E-203ENST00000396832 UBTFL6P0CB48 400 aaPredicted RBP25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 FDX1P10109 184 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 TROVE2P10155 538 aaKnown RBP eCLIP25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 RANBP1P43487 201 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 AOC3Q16853 763 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 TDRPQ86YL5 185 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 ZCCHC9Q8N567 271 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 ANKFY1Q9P2R3 1169 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 CCPG1Q9ULG6 757 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 MRPL11Q9Y3B7 192 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 TYROBPO43914 113 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 HAUS5O94927 633 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 NSFP46459 744 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 QARSP47897 775 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 KBTBD2Q8IY47 623 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 BSNDQ8WZ55 320 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 NSL1Q96IY1 281 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 ALG13Q9NP73 1137 aaKnown RBP25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 SENP1Q9P0U3 644 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 HEY2Q9UBP5 337 aa25.28■■□□□ 1.64
CSNK1E-203ENST00000396832 A0A0G2JND7 137 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 GTF2BQ00403 316 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 ANKMY2Q8IV38 441 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 ZNF398Q8TD17 642 aa25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 ZNF184Q99676 751 aaPredicted RBP25.27■■□□□ 1.64
CSNK1E-203ENST00000396832 KRT82Q9NSB4 513 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms