RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TWNKQ96RR1 684 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 ADAM2Q99965 735 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 ZSWIM1Q9BR11 485 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 MRPL45Q9BRJ2 306 aaKnown RBP9.19□□□□□ -0.94
TDP1-203ENST00000393454 DNM1LO00429 736 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 PIRO00625 290 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 PTGESO14684 152 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 MGEA5O60502 916 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 CAND2O75155 1236 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 LSM8O95777 96 aaKnown RBP9.19□□□□□ -0.94
TDP1-203ENST00000393454 THP07101 528 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 CCL5P13501 91 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 CYP3A5P20815 502 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 RRM1P23921 792 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 PNPLA4P41247 253 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 PAFAH1B1P43034 410 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 TAF6P49848 677 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 RAB27AP51159 221 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 TCEAL1Q15170 157 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 SGO2Q562F6 1265 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 DENND1BQ6P3S1 775 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 MON1BQ7L1V2 547 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 NT5DC3Q86UY8 548 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 USP38Q8NB14 1042 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 SLC43A3Q8NBI5 491 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 WHAMMQ8TF30 809 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 BTBD6Q96KE9 485 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 NT5C1AQ9BXI3 368 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 SLC38A7Q9NVC3 462 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 UVRAGQ9P2Y5 699 aa9.19□□□□□ -0.94
TDP1-203ENST00000393454 ARL5CA6NH57 179 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 KPNA7A9QM74 516 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 PDE2AO00408 941 aaPredicted RBP9.18□□□□□ -0.94
TDP1-203ENST00000393454 CALB1P05937 261 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 VDRP11473 427 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 HADHBP55084 474 aaKnown RBP9.18□□□□□ -0.94
TDP1-203ENST00000393454 RNASE9P60153 205 aaKnown RBP9.18□□□□□ -0.94
TDP1-203ENST00000393454 INCA1Q0VD86 236 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 SV2CQ496J9 727 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 LLGL2Q6P1M3 1020 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 ERICH1Q86X53 443 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 PHF13Q86YI8 300 aaPredicted RBP9.18□□□□□ -0.94
TDP1-203ENST00000393454 CREG2Q8IUH2 290 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 OR6B3Q8NGW1 331 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 MS4A14Q96JA4 679 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 PPP1R10Q96QC0 940 aaKnown RBP9.18□□□□□ -0.94
TDP1-203ENST00000393454 SELENOOQ9BVL4 669 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 SMARCAL1Q9NZC9 954 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 EHD2Q9NZN4 543 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 PCDHGC3Q9UN70 934 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 STXBP5LQ9Y2K9 1186 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 GIT1Q9Y2X7 761 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 ALG6Q9Y672 507 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 SQORQ9Y6N5 450 aa9.18□□□□□ -0.94
TDP1-203ENST00000393454 CEP104O60308 925 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 HUS1O60921 280 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 MTA2O94776 668 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 SKIP12755 728 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 SCNN1GP51170 649 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 C1QBPQ07021 282 aaKnown RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 DSC3Q14574 896 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 C11orf63Q6NUN7 778 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 RSRC2Q7L4I2 434 aaKnown RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 MRPL10Q7Z7H8 261 aaKnown RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 ACOT1Q86TX2 421 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 VCPIP1Q96JH7 1222 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 PBKQ96KB5 322 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 ZNF518BQ9C0D4 1074 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 FAM124BQ9H5Z6 455 aaPredicted RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 SYNCQ9H7C4 482 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 RSAD1Q9HA92 442 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 ABCB6Q9NP58 842 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 AVENQ9NQS1 362 aaPredicted RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 PAK6Q9NQU5 681 aaPredicted RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 WBP1LQ9NX94 342 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 MIOSQ9NXC5 875 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 ANAPC7Q9UJX3 599 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 INPP5FQ9Y2H2 1132 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 A0A0U1RQF3 1178 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 A8MXQ7 604 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 M0QYV0 167 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 SPTLC1O15269 473 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 SPOPO43791 374 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 PQBP1O60828 265 aaKnown RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 ZNF623O75123 536 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 MICAL2O94851 1124 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 PDGFRBP09619 1106 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 RHOXF2BP0C7M4 288 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 HSPA6P17066 643 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 COMTP21964 271 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 MMP8P22894 467 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 GNL1P36915 607 aaPredicted RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 AFF1P51825 1210 aaKnown RBP9.17□□□□□ -0.94
TDP1-203ENST00000393454 LILRA4P59901 499 aa9.17□□□□□ -0.94
TDP1-203ENST00000393454 C2orf54Q08AI8 447 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms