RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 KBTBD4Q9NVX7 518 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 AIM2O14862 343 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 XPO1O14980 1071 aaKnown RBP20.61■□□□□ 0.89
SHANK1-203ENST00000391813 HUNKP57058 714 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 PTENP60484 403 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 DAB2P98082 770 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 IZUMO2Q6UXV1 221 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 TMC3Q7Z5M5 1100 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 MAGEB5Q9BZ81 275 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 CDC42EP4Q9H3Q1 356 aaKnown RBP20.61■□□□□ 0.89
SHANK1-203ENST00000391813 XPO7Q9UIA9 1087 aaKnown RBP20.61■□□□□ 0.89
SHANK1-203ENST00000391813 KCNH4Q9UQ05 1017 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 GPD1LQ8N335 351 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 ASPSCR1Q9BZE9 553 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 ADNPQ9H2P0 1102 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 ATXN2Q99700 1313 aaKnown RBP20.61■□□□□ 0.89
SHANK1-203ENST00000391813 NMT1P30419 496 aaKnown RBP20.61■□□□□ 0.89
SHANK1-203ENST00000391813 TERB1Q8NA31 727 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 TATDN2Q93075 761 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 TMEM117Q9H0C3 514 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 CAAP1Q9H8G2 361 aa20.61■□□□□ 0.89
SHANK1-203ENST00000391813 CNTNAP5Q8WYK1 1306 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 M0R3G1 203 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 ANGPT2O15123 496 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 EIF3DO15371 548 aaKnown RBP eCLIP20.6■□□□□ 0.89
SHANK1-203ENST00000391813 SREBF2Q12772 1141 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 CENPPQ6IPU0 288 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 CREG2Q8IUH2 290 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 PRPF18Q99633 342 aaKnown RBP20.6■□□□□ 0.89
SHANK1-203ENST00000391813 POU5F1BQ06416 359 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 PPIL6Q8IXY8 311 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 MREGQ8N565 214 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 ROR2Q01974 943 aaKnown RBP20.6■□□□□ 0.89
SHANK1-203ENST00000391813 FASTKD1Q53R41 847 aaKnown RBP20.6■□□□□ 0.89
SHANK1-203ENST00000391813 GPR141Q7Z602 305 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 TMA16Q96EY4 203 aaKnown RBP20.6■□□□□ 0.89
SHANK1-203ENST00000391813 TLR10Q9BXR5 811 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 PAK5Q9P286 719 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 PCDHB2Q9Y5E7 798 aa20.6■□□□□ 0.89
SHANK1-203ENST00000391813 S100A5P33763 92 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 ZNF555Q8NEP9 628 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 REEP2Q9BRK0 252 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 KLHL4Q9C0H6 718 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 RAB6BQ9NRW1 208 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 SLC24A2Q9UI40 661 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 FAM200BP0CF97 657 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 ALDH5A1P51649 535 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 ELMSAN1Q6PJG2 1045 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 NDUFAF2Q8N183 169 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 HDAC7Q8WUI4 952 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 EXT2Q93063 718 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 LXNQ9BS40 222 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 PCMTD2Q9NV79 361 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 PPP2R3BQ9Y5P8 575 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 LRRC10BA6NIK2 292 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 AP3B1O00203 1094 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 MTMR2Q13614 643 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 C16orf86Q6ZW13 317 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 METTL23Q86XA0 190 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 ZNF677Q86XU0 584 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 SKA2Q8WVK7 121 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 KLF6Q99612 283 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 SLC12A6Q9UHW9 1150 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 ADGRA3Q8IWK6 1321 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 VEGFAP15692 232 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 CDH2P19022 906 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 TOB1P50616 345 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 MEA1Q16626 185 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 ZBTB41Q5SVQ8 909 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 TTC33Q6PID6 262 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 LDHDQ86WU2 507 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 SLC30A5Q8TAD4 765 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 ZNF483Q8TF39 744 aaPredicted RBP20.59■□□□□ 0.89
SHANK1-203ENST00000391813 TRAPPC9Q96Q05 1148 aa20.59■□□□□ 0.89
SHANK1-203ENST00000391813 APOL1O14791 398 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 SLC25A27O95847 323 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 APRTP07741 180 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 PSMC3P17980 439 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 SERPINB8P50452 374 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 C4orf22Q6V702 233 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 ADGRF4Q8IZF3 695 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 INPP5DQ92835 1189 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 RNPEPL1Q9HAU8 725 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 LOC100653049A0A140TA62 436 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 KRT34O76011 436 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 MYL3P08590 195 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 SNAP25P60880 206 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 CHI3L2Q15782 390 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 UGP2Q16851 508 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 C18orf8Q96DM3 657 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 MTMR8Q96EF0 704 aa20.58■□□□□ 0.89
SHANK1-203ENST00000391813 C20orf96Q9NUD7 363 aaPredicted RBP20.58■□□□□ 0.89
SHANK1-203ENST00000391813 POLRMTO00411 1230 aaKnown RBP20.58■□□□□ 0.88
SHANK1-203ENST00000391813 MTDHQ86UE4 582 aaKnown RBP20.58■□□□□ 0.88
SHANK1-203ENST00000391813 CATSPER3Q86XQ3 398 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 EHD4Q9H223 541 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 SENP2Q9HC62 589 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 C3P01024 1663 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 PJA2O43164 708 aa20.58■□□□□ 0.88
SHANK1-203ENST00000391813 PPARGP37231 505 aaPredicted RBP20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms