RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 LRP10Q7Z4F1 713 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
PSME4-201ENST00000389993 UBP1Q9NZI7 540 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 FCGRTP55899 365 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 RBBP7Q16576 425 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 DENND5BQ6ZUT9 1274 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 ANLNQ9NQW6 1124 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 ADAMTS3O15072 1205 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 PAMP19021 973 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 RECQLP46063 649 aaPredicted RBP15.3■□□□□ 0.04
PSME4-201ENST00000389993 ALDH18A1P54886 795 aaKnown RBP15.3■□□□□ 0.04
PSME4-201ENST00000389993 CYP24A1Q07973 514 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 KLC3Q6P597 504 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 NLRP14Q86W24 1093 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 EFCAB13Q8IY85 973 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 RFWD2Q8NHY2 731 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 NUDT5Q9UKK9 219 aa15.3■□□□□ 0.04
PSME4-201ENST00000389993 H3BRB1 525 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 CCNI2Q6ZMN8 369 aaPredicted RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 CCDC60Q8IWA6 550 aaPredicted RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 PIP4K2CQ8TBX8 421 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 EDEM1Q92611 657 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 TUT1Q9H6E5 874 aaKnown RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 GNGT2O14610 69 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 BMP6P22004 513 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 TRMT10CQ7L0Y3 403 aaKnown RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 USP38Q8NB14 1042 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 HAS1Q92839 578 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 KIF1AQ12756 1690 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 CYB561D2O14569 222 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 GSTA4O15217 222 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 HOXA7P31268 230 aaPredicted RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 A0A1W2PQJ5 194 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 CFAP69A5D8W1 941 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 MEIS2O14770 477 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 SNX2O60749 519 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 AP3M2P53677 418 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 MPZL3Q6UWV2 235 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 SV2AQ7L0J3 742 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 NUDCD3Q8IVD9 361 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.29■□□□□ 0.043e-7■■■□□ 17.4
PSME4-201ENST00000389993 NPHS2Q9NP85 383 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 PQBP1O60828 265 aaKnown RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 ATP9AO75110 1047 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 GCLCP48506 637 aaPredicted RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 C3orf62Q6ZUJ4 267 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 CDKL3Q8IVW4 592 aaPredicted RBP15.29■□□□□ 0.04
PSME4-201ENST00000389993 EGFL8Q99944 293 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 VCXQ9H320 206 aa15.29■□□□□ 0.04
PSME4-201ENST00000389993 F8VZ95 297 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 AP1G2O75843 785 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 SEC24CP53992 1094 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 GLB1LQ6UWU2 654 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 ZFP69BQ9UJL9 534 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 MAFGO15525 162 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 ACTN3Q08043 901 aaPredicted RBP15.28■□□□□ 0.04
PSME4-201ENST00000389993 GRIK4Q16099 956 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 SV2CQ496J9 727 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 TMEM121Q9BTD3 319 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 KIAA1683Q9H0B3 1180 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.28■□□□□ 0.04
PSME4-201ENST00000389993 GMNCA6NCL1 334 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 PRR23AA6NEV1 266 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 IL18RAPO95256 599 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 GHRP10912 638 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 WEE1P30291 646 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 NAMPTP43490 491 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 UGCGQ16739 394 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 NYAP1Q6ZVC0 841 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 CISHQ9NSE2 258 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 TPX2Q9ULW0 747 aaKnown RBP15.28■□□□□ 0.04
PSME4-201ENST00000389993 ANKRD26Q9UPS8 1709 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 YDJCA8MPS7 323 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 OGTO15294 1046 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 COG7P83436 770 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 TMEM259Q4ZIN3 620 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 FAM131BQ86XD5 332 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 TARSL2A2RTX5 802 aaKnown RBP15.28■□□□□ 0.04
PSME4-201ENST00000389993 MAPK13O15264 365 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 TMEM253P0C7T8 217 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 DDIASQ8IXT1 998 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 ATPAF2Q8N5M1 289 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 NETO2Q8NC67 525 aa15.28■□□□□ 0.04
PSME4-201ENST00000389993 PPP1R11O60927 126 aaPredicted RBP15.27■□□□□ 0.04
PSME4-201ENST00000389993 KCNJ6P48051 423 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 SLC29A2Q14542 456 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 MROH9Q5TGP6 573 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 POTEAQ6S8J7 498 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 DNAJC7Q99615 494 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 TRABDQ9H4I3 376 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 DDIT4Q9NX09 232 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 DNAJC6O75061 913 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 RGS2P41220 211 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 EPS8L3Q8TE67 593 aaKnown RBP15.27■□□□□ 0.04
PSME4-201ENST00000389993 EPAS1Q99814 870 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 FGFBP2Q9BYJ0 223 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 ZC3H7BQ9UGR2 993 aaKnown RBP15.27■□□□□ 0.04
PSME4-201ENST00000389993 USH1CQ9Y6N9 552 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 FAM187AA6NFU0 413 aa15.27■□□□□ 0.04
PSME4-201ENST00000389993 PMPCBO75439 489 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms